RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TUFMP49411 452 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 MTAPQ13126 283 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 ZNF528Q3MIS6 628 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 WDR44Q5JSH3 913 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 FOXD4L5Q5VV16 416 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 TMEM150AQ86TG1 271 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 THEM5Q8N1Q8 247 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 GIPC2Q8TF65 315 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 FOXD4L4Q8WXT5 416 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 NELL1Q92832 810 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 TRIM9Q9C026 710 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 PIAS3Q9Y6X2 628 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 LAMTOR5O43504 91 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 HCRTO43612 131 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 PRAMEF12O95522 483 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 MAGEA9P43362 315 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 CYP4F8P98187 520 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 CSTF1Q05048 431 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 CCDC142Q17RM4 750 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 GPR158Q5T848 1215 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 LMBRD2Q68DH5 695 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 TSSK4Q6SA08 328 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 EPM2AIP1Q7L775 607 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 ITIH5Q86UX2 942 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 OSTM1Q86WC4 334 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 CCDC65Q8IXS2 484 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 GPD1LQ8N335 351 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 CSGALNACT2Q8N6G5 542 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 SUMF1Q8NBK3 374 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 STKLD1Q8NE28 680 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 C2orf15Q8WU43 125 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 E2F7Q96AV8 911 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 ZNF560Q96MR9 790 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 PKMYT1Q99640 499 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 MTMR12Q9C0I1 747 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 TMEM206Q9H813 350 aa19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 ABI2Q9NYB9 513 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 MRPS17Q9Y2R5 130 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-205ENST00000393551 CEP250Q9BV73 2442 aa19.64■□□□□ 0.74
PDLIM7-205ENST00000393551 TULP1O00294 542 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 MAN2B1O00754 1011 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 CHADO15335 359 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 NCAM2O15394 837 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 YEATS4O95619 227 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 HMGA1P17096 107 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 PNPLA4P41247 253 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 GPR15P49685 360 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 CBWD2Q8IUF1 395 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 OR5B17Q8NGF7 314 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 FAM200AQ8TCP9 573 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 SPPL2BQ8TCT7 592 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 KCNG4Q8TDN1 519 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 FAM3CQ92520 227 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 DHX58Q96C10 678 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 ZFYVE19Q96K21 471 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 SLC46A2Q9BY10 475 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 PRMT8Q9NR22 394 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 GDAP2Q9NXN4 497 aa19.64■□□□□ 0.73
PDLIM7-205ENST00000393551 ZNF638Q14966 1978 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 CUTAO60888 179 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 TDGF1P13385 188 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 ACAT1P24752 427 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 CCNE1P24864 410 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 CASP1P29466 404 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 WEE1P30291 646 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 SOX9P48436 509 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 EHHADHQ08426 723 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 SMARCB1Q12824 385 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 PKP1Q13835 747 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 GAS6Q14393 721 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 FOXD4L6Q3SYB3 417 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 CNNM4Q6P4Q7 775 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 ZC3H14Q6PJT7 736 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 FOXD4L3Q6VB84 417 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 LRRC52Q8N7C0 313 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 ZBTB44Q8NCP5 570 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 NOC3LQ8WTT2 800 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 CACTINQ8WUQ7 758 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 ZNF396Q96N95 335 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 SMG9Q9H0W8 520 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 CHRDQ9H2X0 955 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 CUEDC2Q9H467 287 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 TASP1Q9H6P5 420 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 INTS13Q9NVM9 706 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 DDX43Q9NXZ2 648 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 ITGA11Q9UKX5 1188 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 PCDHB5Q9Y5E4 795 aa19.63■□□□□ 0.73
PDLIM7-205ENST00000393551 CACNA1AO00555 2505 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 SLC38A8A6NNN8 435 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 GABRDO14764 452 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 TGFB1I1O43294 461 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 FGF19O95750 216 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 F11P03951 625 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 CHRNB1P11230 501 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 MLLT6P55198 1093 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 BFSP1Q12934 665 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 VEPH1Q14D04 833 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 SOWAHAQ2M3V2 549 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 SDHAF4Q5VUM1 108 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 TXNDC11Q6PKC3 985 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms