RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 CNTN6Q9UQ52 1028 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 BACE2Q9Y5Z0 518 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 COL4A6Q14031 1691 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 LTBP2Q14767 1821 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 NT5C1B-RDH14C9J2C7 533 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 GABRDO14764 452 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 PPEF2O14830 753 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 SPTLC1O15269 473 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 CYP26A1O43174 497 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 AP5Z1O43299 807 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 LSM8O95777 96 aaKnown RBP3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 ADH1AP07327 375 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 SETSIPP0DME0 302 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 CYP11B1P15538 503 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 FXR1P51114 621 aaKnown RBP eCLIP3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 ADKP55263 362 aaKnown RBP3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 CDH8P55286 799 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 ERVK-21P61565 698 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 DSG1Q02413 1049 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 ARID5BQ14865 1188 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 PSMD5Q16401 504 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 ZNF394Q53GI3 561 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 HS1BP3Q53T59 392 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 VARS2Q5ST30 1063 aaKnown RBP3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 TPGS2Q68CL5 300 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 GJB7Q6PEY0 223 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 CHRDL2Q6WN34 429 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 LIMS2Q7Z4I7 341 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 TMCO2Q7Z6W1 182 aaPredicted RBP3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 SPATA2LQ8IUW3 424 aaPredicted RBP3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 CRYBG2Q8N1P7 616 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 KLHL23Q8NBE8 558 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 B3GALNT2Q8NCR0 500 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 TMEM35BQ8NCS4 154 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 C3orf58Q8NDZ4 430 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 RIN2Q8WYP3 895 aaPredicted RBP3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 BAP1Q92560 729 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 TIFAQ96CG3 184 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 TRIM11Q96F44 468 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 FUBP3Q96I24 572 aaKnown RBP eCLIP3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 FAM84AQ96KN4 292 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 KREMEN1Q96MU8 473 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 PAAF1Q9BRP4 392 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 MED10Q9BTT4 135 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 ELOVL4Q9GZR5 314 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 CXCL16Q9H2A7 254 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 SYNCQ9H7C4 482 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 ABCB6Q9NP58 842 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 TLR9Q9NR96 1032 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 MARCH5Q9NX47 278 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 ALPK3Q96L96 1907 aa3.76□□□□□ -1.81
ATP2B1-203ENST00000393164 EPHB6O15197 1021 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 C1RP00736 705 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 PDGFRBP09619 1106 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 FAM200BP0CF97 657 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 SRGAP2BP0DMP2 458 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 CTSAP10619 480 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 PTPN1P18031 435 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 ACO1P21399 889 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 TKTP29401 623 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 NSFP46459 744 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 RAP1GAPP47736 663 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 TUFMP49411 452 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 NDUFV1P49821 464 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 RABGGTBP53611 331 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 BCAT1P54687 386 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 CDR2Q01850 454 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 PLD1Q13393 1074 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 CNGA2Q16280 664 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 LRIT3Q3SXY7 679 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 INTS6LQ5JSJ4 861 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 PRPF38BQ5VTL8 546 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 ARHGAP17Q68EM7 881 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 VSTM1Q6UX27 236 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 RTL10Q7L3V2 364 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 ACOT1Q86TX2 421 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 LRRC8AQ8IWT6 810 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 TC2NQ8N9U0 490 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 MYCBPAPQ8TBZ2 947 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 SPPL2BQ8TCT7 592 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 RABGGTAQ92696 567 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 CYFIP2Q96F07 1278 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 SMARCD1Q96GM5 515 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 CEP295NLQ96MC4 621 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 ARID3AQ99856 593 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 MRPL45Q9BRJ2 306 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 TRIM62Q9BVG3 475 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 PBX4Q9BYU1 374 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 GPR62Q9BZJ7 368 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 HAUS4Q9H6D7 363 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 CHST7Q9NS84 486 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 FNIP2Q9P278 1114 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 HSFX1Q9UBD0 423 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 MTRRQ9UBK8 725 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 STRIP2Q9ULQ0 834 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 PCDHB5Q9Y5E4 795 aa3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 TIMM13Q9Y5L4 95 aaPredicted RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 TDRD15B5MCY1 1934 aaKnown RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.75□□□□□ -1.81
ATP2B1-203ENST00000393164 ANKRD62A6NC57 917 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms