RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 EP400Q96L91 3159 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 ZMYM2Q9UBW7 1377 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 VGLL3A8MV65 326 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 CST8O60676 142 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 STX2P32856 288 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 FLT3LGP49771 235 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 TSPY1Q01534 308 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 TAP1Q03518 808 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ITIH3Q06033 890 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ZKSCAN8Q15776 578 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-204ENST00000391945 TMEM63BQ5T3F8 832 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 HHATQ5VTY9 493 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 PDZD4Q76G19 769 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-204ENST00000391945 CACNA2D3Q8IZS8 1091 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 CASKIN2Q8WXE0 1202 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 PCDHB18PQ96TA0 734 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ASB7Q9H672 318 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 PYGMP11217 842 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ACAT1P24752 427 aaKnown RBP13.5□□□□□ -0.25
ERCC2-204ENST00000391945 MARCKSL1P49006 195 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 PMS2P54278 862 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 TMED2Q15363 201 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 SMAD1Q15797 465 aaKnown RBP13.5□□□□□ -0.25
ERCC2-204ENST00000391945 IZUMO3Q5VZ72 239 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ATL2Q8NHH9 583 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 SIX2Q9NPC8 291 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 COMMD10Q9Y6G5 202 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.5□□□□□ -0.25
ERCC2-204ENST00000391945 WNK3Q9BYP7 1800 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 NRCAMQ92823 1304 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 CCL14Q16627 93 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 FAM117BQ6P1L5 589 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ARHGEF18Q6ZSZ5 1173 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 EXOC1LA0A1B0GW35 172 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 POMCP01189 267 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 MMP3P08254 477 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ZBTB48P10074 688 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-204ENST00000391945 PHBP35232 272 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ZBTB16Q05516 673 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 NFIL3Q16649 462 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 FBXO47Q5MNV8 452 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 PDIK1LQ8N165 341 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 ERP44Q9BS26 406 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 MLXIPLQ9NP71 852 aa13.5□□□□□ -0.25
ERCC2-204ENST00000391945 MOCS2O96007 188 aaPredicted RBP13.49□□□□□ -0.25
ERCC2-204ENST00000391945 SV2CQ496J9 727 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 CCDC14Q49A88 953 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 DCAF6Q58WW2 860 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 GKAP1Q5VSY0 366 aaPredicted RBP13.49□□□□□ -0.25
ERCC2-204ENST00000391945 RCOR2Q8IZ40 523 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 PYROXD1Q8WU10 500 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 FAF2Q96CS3 445 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 STAP1Q9ULZ2 295 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 MYH8P13535 1937 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 MYH4Q9Y623 1939 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 HMGB1P1B2RPK0 211 aaPredicted RBP13.49□□□□□ -0.25
ERCC2-204ENST00000391945 GPR25O00155 361 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 VDRP11473 427 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 SARNPP82979 210 aaKnown RBP13.49□□□□□ -0.25
ERCC2-204ENST00000391945 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 C9orf72Q96LT7 481 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 MTG1Q9BT17 334 aaPredicted RBP13.49□□□□□ -0.25
ERCC2-204ENST00000391945 DDX56Q9NY93 547 aaKnown RBP13.49□□□□□ -0.25
ERCC2-204ENST00000391945 TSPAN16Q9UKR8 245 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 LAMB2P55268 1798 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 TRIM66O15016 1216 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 ELNP15502 786 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 ATP4AP20648 1035 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 OR1G1P47890 313 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 ATN1P54259 1190 aaPredicted RBP13.49□□□□□ -0.25
ERCC2-204ENST00000391945 INHBEP58166 350 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 ZNF200P98182 395 aaPredicted RBP13.49□□□□□ -0.25
ERCC2-204ENST00000391945 ZNF410Q86VK4 478 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 TTC13Q8NBP0 860 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 PLEKHO2Q8TD55 490 aa13.49□□□□□ -0.25
ERCC2-204ENST00000391945 CYB561D2O14569 222 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 PPP1R37O75864 691 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 PROSCO94903 275 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 EIF3EP60228 445 aaKnown RBP13.48□□□□□ -0.25
ERCC2-204ENST00000391945 STILQ15468 1287 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 GLB1LQ6UWU2 654 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 CCDC33Q8N5R6 958 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 DNAAF3Q8N9W5 541 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 ACTRT1Q8TDG2 376 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 GAD1Q99259 594 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 R3HDMLQ9H3Y0 253 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 MROH7Q68CQ1 1323 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 SCN9AQ15858 1988 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 DDX60LQ5H9U9 1706 aaKnown RBP13.48□□□□□ -0.25
ERCC2-204ENST00000391945 ARHGEF37A1IGU5 675 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 TREHO43280 583 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 FAM153BP0C7A2 387 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 FAM153CQ494X1 144 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 CCDC38Q502W7 563 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 URGCPQ8TCY9 931 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 TRIM7Q9C029 511 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 GPATCH2LQ9NWQ4 482 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 FAM153AQ9UHL3 310 aa13.48□□□□□ -0.25
ERCC2-204ENST00000391945 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms