RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MRPS9P82933 396 aaKnown RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 ZNF268Q14587 947 aaPredicted RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 RNF43Q68DV7 783 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 RSBN1LQ6PCB5 846 aaPredicted RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 CCDC97Q96F63 343 aaPredicted RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 HEXIM2Q96MH2 286 aaKnown RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 TMEM121Q9BTD3 319 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 NCANO14594 1321 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 SLITRK3O94933 977 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 LDHAP00338 332 aaKnown RBP14.92□□□□□ -0.02
RTF1-201ENST00000389629 STX1BP61266 288 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 TMA16Q96EY4 203 aaKnown RBP14.92□□□□□ -0.02
RTF1-201ENST00000389629 MEI4A8MW99 385 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 SSTR1P30872 391 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 CDH6P55285 790 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 CCDC92Q53HC0 331 aaPredicted RBP14.92□□□□□ -0.02
RTF1-201ENST00000389629 FAM71DQ8N9W8 422 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 GORASP1Q9BQQ3 440 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 KCNMB3Q9NPA1 279 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 APPL1Q9UKG1 709 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 TPP2P29144 1249 aaPredicted RBP14.92□□□□□ -0.02
RTF1-201ENST00000389629 COPAP53621 1224 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 TFDP2Q14188 446 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 SLC27A3Q5K4L6 730 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 PODNQ7Z5L7 613 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 ECHDC2Q86YB7 292 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 KCNH7Q9NS40 1196 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 CLIC5Q9NZA1 410 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 MYH10P35580 1976 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 MED1Q15648 1581 aaPredicted RBP14.92□□□□□ -0.02
RTF1-201ENST00000389629 IGSF9BQ9UPX0 1349 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 DDX3YO15523 660 aaKnown RBP14.92□□□□□ -0.02
RTF1-201ENST00000389629 CALCAP01258 141 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 FAM43BQ6ZT52 329 aaPredicted RBP14.92□□□□□ -0.02
RTF1-201ENST00000389629 ACAD11Q709F0 780 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 POU5F2Q8N7G0 328 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 POLLQ9UGP5 575 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 LMO7Q8WWI1 1683 aa14.92□□□□□ -0.02
RTF1-201ENST00000389629 SLURP2P0DP57 97 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 SHMT1P34896 483 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 OCRLQ01968 901 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 ZNF699Q32M78 642 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 C7orf31Q8N865 590 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 ZNF483Q8TF39 744 aaPredicted RBP14.91□□□□□ -0.02
RTF1-201ENST00000389629 KCNK16Q96T55 309 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 SNRPAP09012 282 aaKnown RBP14.91□□□□□ -0.02
RTF1-201ENST00000389629 PYGBP11216 843 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 BCAR1P56945 870 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 PPP3CAQ08209 521 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 FAXCQ5TGI0 409 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 CWF19L1Q69YN2 538 aaKnown RBP14.91□□□□□ -0.02
RTF1-201ENST00000389629 NLGN1Q8N2Q7 840 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 ART4Q93070 314 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 TLCD1Q96CP7 247 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 ZMAT2Q96NC0 199 aaKnown RBP14.91□□□□□ -0.02
RTF1-201ENST00000389629 MXRA8Q9BRK3 442 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 DDX4Q9NQI0 724 aaKnown RBP14.91□□□□□ -0.02
RTF1-201ENST00000389629 FEM1BQ9UK73 627 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 KRT3P12035 628 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 NPR1P16066 1061 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 PCYT1AP49585 367 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 TFDP1Q14186 410 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 CCNG2Q16589 344 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 C6orf89Q6UWU4 347 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 KCTD17Q8N5Z5 321 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 PYDC1Q8WXC3 89 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 PPP2R3CQ969Q6 453 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.91□□□□□ -0.02
RTF1-201ENST00000389629 KCNN4O15554 427 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 RBP3P10745 1247 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 VCAM1P19320 739 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 SESN2P58004 480 aaPredicted RBP14.91□□□□□ -0.02
RTF1-201ENST00000389629 IGBP1P78318 339 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 AP1B1Q10567 949 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 FOXR2Q6PJQ5 311 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 ARHGAP26Q9UNA1 814 aa14.91□□□□□ -0.02
RTF1-201ENST00000389629 TOPAZ1Q8N9V7 1692 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 TTC36A6NLP5 189 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PIK3R2O00459 728 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PGM3O95394 542 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 ZSCAN5DPP0CG00 497 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 SFNP31947 248 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PRPSAP1Q14558 356 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 TRMT5Q32P41 509 aaKnown RBP14.9□□□□□ -0.02
RTF1-201ENST00000389629 PALB2Q86YC2 1186 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 SP8Q8IXZ3 490 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 FAM81AQ8TBF8 368 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 SDCCAG3Q96C92 435 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 ZNF668Q96K58 619 aaPredicted RBP14.9□□□□□ -0.02
RTF1-201ENST00000389629 SIKE1Q9BRV8 207 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 STARD13Q9Y3M8 1113 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 GJA3Q9Y6H8 435 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 SPDYE5A6NIY4 337 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 KLHL2O95198 593 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 TMED10P49755 219 aaKnown RBP14.9□□□□□ -0.02
RTF1-201ENST00000389629 EPS8L1Q8TE68 723 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 RIT2Q99578 217 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms