RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ZNF687Q8N1G0 1237 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 DCLK2Q8N568 766 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 LINC00301Q8NCQ3 95 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 DEPDC1BQ8WUY9 529 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 ZNF560Q96MR9 790 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 ZSCAN16Q9H4T2 348 aaPredicted RBP15.26■□□□□ 0.03
SHOX-202ENST00000381575 PDE11AQ9HCR9 933 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 DSEQ9UL01 958 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 MRPS17Q9Y2R5 130 aaKnown RBP15.26■□□□□ 0.03
SHOX-202ENST00000381575 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 GREB1Q4ZG55 1949 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 ARNTLO00327 626 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 SPTLC2O15270 562 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 KRT19P08727 400 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 ACAT1P24752 427 aaKnown RBP15.25■□□□□ 0.03
SHOX-202ENST00000381575 CCNE1P24864 410 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 ITIH5Q86UX2 942 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 KIAA2013Q8IYS2 634 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 THEM5Q8N1Q8 247 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 PDCL2Q8N4E4 241 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 FAM3CQ92520 227 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 DHX58Q96C10 678 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 PI4K2AQ9BTU6 479 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 MTMR12Q9C0I1 747 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 IL21Q9HBE4 155 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 ASB3Q9Y575 518 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 RALGAPA1Q6GYQ0 2036 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 PTPRDP23468 1912 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 PTPRJQ12913 1337 aa15.25■□□□□ 0.03
SHOX-202ENST00000381575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 NCAM2O15394 837 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 GARTP22102 1010 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 PAX3P23760 479 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 CASP1P29466 404 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 VEPH1Q14D04 833 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 E2F4Q16254 413 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 TAF12Q16514 161 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 OSTM1Q86WC4 334 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 CCDC65Q8IXS2 484 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 CSGALNACT2Q8N6G5 542 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 CSGALNACT1Q8TDX6 532 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 NELL2Q99435 816 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 GPR88Q9GZN0 384 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 RBM12Q9NTZ6 932 aaKnown RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 SIX4Q9UIU6 781 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 FBXO4Q9UKT5 387 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 MAN2B1O00754 1011 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 DPYSL4O14531 572 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 EXTL3O43909 919 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 KINO60870 393 aaKnown RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 HAPLN1P10915 354 aaPredicted RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 MAGEA9P43362 315 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 RPS9P46781 194 aaKnown RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 TUFMP49411 452 aaKnown RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 KPNA1P52294 538 aaPredicted RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 ASIC1P78348 528 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 POU5F1Q01860 360 aaKnown RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 TNK2Q07912 1038 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 ARHGAP15Q53QZ3 475 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 WDR44Q5JSH3 913 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 TXNDC11Q6PKC3 985 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 NT5DC4Q86YG4 428 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 SUMF1Q8NBK3 374 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 OR5B17Q8NGF7 314 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 CXorf38Q8TB03 319 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 SPPL2BQ8TCT7 592 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 SEMA4AQ9H3S1 761 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 LMAN1LQ9HAT1 526 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 GTSE1Q9NYZ3 720 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 MAGED2Q9UNF1 606 aaPredicted RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 PCDHB5Q9Y5E4 795 aa15.24■□□□□ 0.03
SHOX-202ENST00000381575 MORC2Q9Y6X9 1032 aaPredicted RBP15.24■□□□□ 0.03
SHOX-202ENST00000381575 NCOR2Q9Y618 2525 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 SPAG17Q6Q759 2223 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 CHADO15335 359 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 PRPF40AO75400 957 aaKnown RBP15.23■□□□□ 0.03
SHOX-202ENST00000381575 LDHAP00338 332 aaKnown RBP15.23■□□□□ 0.03
SHOX-202ENST00000381575 TMEM191BP0C7N4 346 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 HOXD13P35453 343 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 TSPY1Q01534 308 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 FCHO2Q0JRZ9 810 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 ALCAMQ13740 583 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 ZNF528Q3MIS6 628 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 SHC4Q6S5L8 630 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 CBWD2Q8IUF1 395 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 DCP1BQ8IZD4 617 aaKnown RBP15.23■□□□□ 0.03
SHOX-202ENST00000381575 GPD1LQ8N335 351 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 GCNAQ96QF7 691 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 TRIM9Q9C026 710 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 CHRDQ9H2X0 955 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 TASP1Q9H6P5 420 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 TRPV5Q9NQA5 729 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 PRMT8Q9NR22 394 aaPredicted RBP15.23■□□□□ 0.03
SHOX-202ENST00000381575 DDX43Q9NXZ2 648 aaKnown RBP15.23■□□□□ 0.03
SHOX-202ENST00000381575 HSFX1Q9UBD0 423 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 SNX9Q9Y5X1 595 aa15.23■□□□□ 0.03
SHOX-202ENST00000381575 HELZP42694 1942 aaKnown RBP15.22■□□□□ 0.03
SHOX-202ENST00000381575 HUS1O60921 280 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms