RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 LETM1O95202 739 aaPredicted RBP17.32■□□□□ 0.36
SNRPB-201ENST00000381342 MTIF2P46199 727 aaKnown RBP17.32■□□□□ 0.36
SNRPB-201ENST00000381342 RAP1GAPP47736 663 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 NOP14P78316 857 aaKnown RBP17.32■□□□□ 0.36
SNRPB-201ENST00000381342 RAB33AQ14088 237 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 SGSM1Q2NKQ1 1148 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 ZNF667Q5HYK9 610 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 CYP26C1Q6V0L0 522 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 LIMS2Q7Z4I7 341 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 GPR149Q86SP6 731 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 FAM114A1Q8IWE2 563 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 TMEM86AQ8N2M4 240 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 PLCD3Q8N3E9 789 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 FBXL13Q8NEE6 735 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 ENOX1Q8TC92 643 aaKnown RBP17.32■□□□□ 0.36
SNRPB-201ENST00000381342 ACSF2Q96CM8 615 aaPredicted RBP17.32■□□□□ 0.36
SNRPB-201ENST00000381342 IMPG2Q9BZV3 1241 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 POMKQ9H5K3 350 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 PIDD1Q9HB75 910 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 APOBEC3GQ9HC16 384 aaKnown RBP17.32■□□□□ 0.36
SNRPB-201ENST00000381342 FBXW11Q9UKB1 542 aa17.32■□□□□ 0.36
SNRPB-201ENST00000381342 FAM86C2PA6NEL3 165 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 PRR33A8MZF0 331 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 WEE2P0C1S8 567 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 SP100P23497 879 aaPredicted RBP17.31■□□□□ 0.36
SNRPB-201ENST00000381342 ACAT1P24752 427 aaKnown RBP17.31■□□□□ 0.36
SNRPB-201ENST00000381342 CDR1P51861 262 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 MYL5Q02045 173 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 KCNH2Q12809 1159 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 LILRA6Q6PI73 481 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 THEM5Q8N1Q8 247 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 TDRD5Q8NAT2 981 aaKnown RBP17.31■□□□□ 0.36
SNRPB-201ENST00000381342 TAF4BQ92750 862 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 MRPL45Q9BRJ2 306 aaKnown RBP17.31■□□□□ 0.36
SNRPB-201ENST00000381342 SDCBP2Q9H190 292 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 RAB20Q9NX57 234 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 DDX43Q9NXZ2 648 aaKnown RBP17.31■□□□□ 0.36
SNRPB-201ENST00000381342 MAGEC2Q9UBF1 373 aaPredicted RBP17.31■□□□□ 0.36
SNRPB-201ENST00000381342 HCN4Q9Y3Q4 1203 aa17.31■□□□□ 0.36
SNRPB-201ENST00000381342 PTPRDP23468 1912 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 CCDC195A0A1B0GUA6 201 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 KCNJ18B7U540 433 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 N4BP1O75113 896 aaKnown RBP17.3■□□□□ 0.36
SNRPB-201ENST00000381342 AFPP02771 609 aaKnown RBP17.3■□□□□ 0.36
SNRPB-201ENST00000381342 WARSP23381 471 aaKnown RBP17.3■□□□□ 0.36
SNRPB-201ENST00000381342 ASPAP45381 313 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 KCNJ12Q14500 433 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 CCDC142Q17RM4 750 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 CDKAL1Q5VV42 579 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 RNF19BQ6ZMZ0 732 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 CCDC149Q6ZUS6 474 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 DPH6Q7L8W6 267 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 KREMEN2Q8NCW0 462 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 CMASQ8NFW8 434 aaPredicted RBP17.3■□□□□ 0.36
SNRPB-201ENST00000381342 FEZF2Q8TBJ5 459 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 PGLYRP2Q96PD5 576 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 OXCT2Q9BYC2 517 aaPredicted RBP17.3■□□□□ 0.36
SNRPB-201ENST00000381342 NIF3L1Q9GZT8 377 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 COQ4Q9Y3A0 265 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 DENND4AQ7Z401 1863 aa17.3■□□□□ 0.36
SNRPB-201ENST00000381342 GABRDO14764 452 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 P4HA1P13674 534 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 CDH8P55286 799 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 SLC39A12Q504Y0 691 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 LIN9Q5TKA1 542 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 OTOP3Q7RTS5 596 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 CCDC150Q8NCX0 1101 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 SLC7A14Q8TBB6 771 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 SPATA18Q8TC71 538 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 EDAQ92838 391 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 NAT10Q9H0A0 1025 aaKnown RBP17.29■□□□□ 0.36
SNRPB-201ENST00000381342 ZCWPW1Q9H0M4 648 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 SNX25Q9H3E2 840 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 CDH22Q9UJ99 828 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 USTQ9Y2C2 406 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 NME7Q9Y5B8 376 aa17.29■□□□□ 0.36
SNRPB-201ENST00000381342 TACC1O75410 805 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 RFPL2O75678 378 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 ABLIM3O94929 683 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 SEC24AO95486 1093 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 VNN2O95498 520 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 C8AP07357 584 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 LMO2P25791 158 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 LHX1P48742 406 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 PSMC1P62191 440 aaKnown RBP17.28■□□□□ 0.36
SNRPB-201ENST00000381342 TSPY1Q01534 308 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 ADCY1Q08828 1119 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 NCAPHQ15003 741 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 MAN2A1Q16706 1144 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 TCP11X2Q5H9J9 407 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 OR6B3Q8NGW1 331 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 ZNF461Q8TAF7 563 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 SMG7Q92540 1137 aaKnown RBP17.28■□□□□ 0.36
SNRPB-201ENST00000381342 BPIFA3Q9BQP9 254 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 SYT15Q9BQS2 421 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 TUBGCP2Q9BSJ2 902 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 BCO2Q9BYV7 579 aa17.28■□□□□ 0.36
SNRPB-201ENST00000381342 ZDHHC7Q9NXF8 308 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms