RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 WRNIP1Q96S55 665 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 PHIPQ8WWQ0 1821 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 MAGEB2O15479 319 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 EDN1P05305 212 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
VPS16-203ENST00000380469 ALDH5A1P51649 535 aaPredicted RBP17.21■□□□□ 0.35
VPS16-203ENST00000380469 GRM1Q13255 1194 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 SGSM1Q2NKQ1 1148 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 GPAT2Q6NUI2 795 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ZPBP2Q6X784 338 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 PCGF5Q86SE9 256 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 FBF1Q8TES7 1133 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.35
VPS16-203ENST00000380469 NKD2Q969F2 451 aaPredicted RBP17.21■□□□□ 0.35
VPS16-203ENST00000380469 HAUS1Q96CS2 278 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 PCDH9Q9HC56 1237 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 ARHGEF3Q9NR81 526 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 SHOC2Q9UQ13 582 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 STARD13Q9Y3M8 1113 aa17.21■□□□□ 0.35
VPS16-203ENST00000380469 TCRBV5S1A1TA0A578 114 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 IFNB1P01574 187 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 SKIV2L2P42285 1042 aaKnown RBP17.2■□□□□ 0.34
VPS16-203ENST00000380469 CDKN2BP42772 138 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 MYL6P60660 151 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 TRPC3Q13507 836 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 CAPSQ13938 189 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 FASTKD3Q14CZ7 662 aaKnown RBP17.2■□□□□ 0.34
VPS16-203ENST00000380469 SETDB1Q15047 1291 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 OASLQ15646 514 aaKnown RBP17.2■□□□□ 0.34
VPS16-203ENST00000380469 PKN2Q16513 984 aaKnown RBP17.2■□□□□ 0.34
VPS16-203ENST00000380469 ZNF394Q53GI3 561 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 RNASEH2BQ5TBB1 312 aaKnown RBP17.2■□□□□ 0.34
VPS16-203ENST00000380469 CATSPERGQ6ZRH7 1159 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 SAMD7Q7Z3H4 446 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 ZBTB33Q86T24 672 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 CISHQ9NSE2 258 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 SLC24A2Q9UI40 661 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 DOCK1Q14185 1865 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 EIF4BP23588 611 aaKnown RBP17.2■□□□□ 0.34
VPS16-203ENST00000380469 EFNA5P52803 228 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 OGDHQ02218 1023 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 PDIA2Q13087 525 aaKnown RBP17.2■□□□□ 0.34
VPS16-203ENST00000380469 CCDC142Q17RM4 750 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 CAPN12Q6ZSI9 719 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 ECHDC2Q86YB7 292 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 KIF2BQ8N4N8 673 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 NIPA2Q8N8Q9 360 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 DNERQ8NFT8 737 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 DENND1AQ8TEH3 1009 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 ACSF2Q96CM8 615 aaPredicted RBP17.2■□□□□ 0.34
VPS16-203ENST00000380469 TMEM121Q9BTD3 319 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 CXorf56Q9H5V9 222 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 ZNF112Q9UJU3 913 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 AGTPBP1Q9UPW5 1226 aa17.2■□□□□ 0.34
VPS16-203ENST00000380469 SIP14410 1827 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 HGSO14964 777 aaPredicted RBP17.19■□□□□ 0.34
VPS16-203ENST00000380469 KRT16P08779 473 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 TNFSF9P41273 254 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 MGAT5Q09328 741 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 SURF1Q15526 300 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 PPP1R15BQ5SWA1 713 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 SCARA3Q6AZY7 606 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 TXNRD3NBQ6F5E7 133 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 ASRGL1Q7L266 308 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 MRPL4Q9BYD3 311 aaKnown RBP17.19■□□□□ 0.34
VPS16-203ENST00000380469 MTMR12Q9C0I1 747 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 TXLNGQ9NUQ3 528 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 STRIP2Q9ULQ0 834 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 PHTF1Q9UMS5 762 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 STK38LQ9Y2H1 464 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 RLFQ13129 1914 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 TOM1L1O75674 476 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 ALADP13716 330 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 CCNB1P14635 433 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 CA4P22748 312 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 EN1Q05925 392 aaPredicted RBP17.19■□□□□ 0.34
VPS16-203ENST00000380469 DNAJC3Q13217 504 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 WDR72Q3MJ13 1102 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 CYP4A22Q5TCH4 519 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 RGS9BPQ6ZS82 235 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 MICALL2Q8IY33 904 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 LRRC8CQ8TDW0 803 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 PSMC3IPQ9P2W1 217 aaPredicted RBP17.19■□□□□ 0.34
VPS16-203ENST00000380469 PCDHGC3Q9UN70 934 aa17.19■□□□□ 0.34
VPS16-203ENST00000380469 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 IGKV6D-21A0A0A0MT36 114 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 ATP5HO75947 161 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 ALDH3A1P30838 453 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 POLR2BP30876 1174 aaKnown RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 ELF1P32519 619 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 PHBP35232 272 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 LACTBP83111 547 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 RASA2Q15283 850 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 HIF1AQ16665 826 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 HHATQ5VTY9 493 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 FAM160B1Q5W0V3 765 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms