RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 JADE1Q6IE81 842 aa13.35□□□□□ -0.27
VPS16-202ENST00000380445 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
VPS16-202ENST00000380445 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
VPS16-202ENST00000380445 NIPA2Q8N8Q9 360 aa13.35□□□□□ -0.27
VPS16-202ENST00000380445 CCDC89Q8N998 374 aa13.35□□□□□ -0.27
VPS16-202ENST00000380445 CCDC114Q96M63 670 aa13.35□□□□□ -0.27
VPS16-202ENST00000380445 ABHD16BQ9H3Z7 469 aa13.35□□□□□ -0.27
VPS16-202ENST00000380445 DDX56Q9NY93 547 aaKnown RBP13.35□□□□□ -0.27
VPS16-202ENST00000380445 ZSWIM8A7E2V4 1837 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 TJP3O95049 919 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 NFICP08651 508 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 CDC42EP1Q00587 391 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ADCY2Q08462 1091 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
VPS16-202ENST00000380445 DUSP28Q4G0W2 176 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 TTC19Q6DKK2 380 aaPredicted RBP13.34□□□□□ -0.27
VPS16-202ENST00000380445 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ZNF410Q86VK4 478 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 TMEM192Q8IY95 271 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 TFAP2BQ92481 460 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 PARK7Q99497 189 aaKnown RBP13.34□□□□□ -0.27
VPS16-202ENST00000380445 HEMGNQ9BXL5 484 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 KATNBL1Q9H079 304 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 SLC5A4Q9NY91 659 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 SIX4Q9UIU6 781 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 NOVA2Q9UNW9 492 aaKnown RBP13.34□□□□□ -0.27
VPS16-202ENST00000380445 EBAG9O00559 213 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 SNAI1O95863 264 aaPredicted RBP13.34□□□□□ -0.27
VPS16-202ENST00000380445 VTNP04004 478 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ITGB3P05106 788 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ZNF286BP0CG31 522 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ATF2P15336 505 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ARF4P18085 180 aaPredicted RBP13.34□□□□□ -0.27
VPS16-202ENST00000380445 GJC1P36383 396 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 SLC29A2Q14542 456 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 DGKDQ16760 1214 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 PPP1R15BQ5SWA1 713 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 C6orf118Q5T5N4 469 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 GPR142Q7Z601 462 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 WDTC1Q8N5D0 677 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 CCHCR1Q8TD31 782 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ATG4AQ8WYN0 398 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 PGM2Q96G03 612 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ACAP3Q96P50 834 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 STMN4Q9H169 189 aaPredicted RBP13.34□□□□□ -0.27
VPS16-202ENST00000380445 POLIQ9UNA4 740 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 C2CD2Q9Y426 696 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 ANK1P16157 1881 aa13.34□□□□□ -0.27
VPS16-202ENST00000380445 LSP1P33241 339 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 GRB14Q14449 540 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 TMEM132DQ14C87 1099 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 DAB2IPQ5VWQ8 1189 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 CEP128Q6ZU80 1094 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 BRI3BPQ8WY22 251 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 CPB2Q96IY4 423 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 MAML3Q96JK9 1138 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 TMEM109Q9BVC6 243 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 TRAIPQ9BWF2 469 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 EPB41L4BQ9H329 900 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.27
VPS16-202ENST00000380445 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.27
VPS16-202ENST00000380445 SIGLEC16A6NMB1 481 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 KRT3P12035 628 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 HOXD8P13378 290 aaPredicted RBP13.33□□□□□ -0.28
VPS16-202ENST00000380445 ADCY8P40145 1251 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 RAD23BP54727 409 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 GUCY1A3Q02108 690 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 GRIK4Q16099 956 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 FAM110CQ1W6H9 321 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 FNIP1Q8TF40 1166 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
VPS16-202ENST00000380445 TMEM176AQ96HP8 235 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 EPN3Q9H201 632 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 SEMA4AQ9H3S1 761 aa13.33□□□□□ -0.28
VPS16-202ENST00000380445 A0A1B0GUA9 196 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 RRN3P2A6NIE6 340 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 NDUFAB1O14561 156 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 RIPK2O43353 540 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 CSDE1O75534 798 aaKnown RBP13.32□□□□□ -0.28
VPS16-202ENST00000380445 GJB6O95452 261 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 KRT1P04264 644 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 MMP3P08254 477 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 PTPN7P35236 360 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 MAGOHP61326 146 aaKnown RBP13.32□□□□□ -0.28
VPS16-202ENST00000380445 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
VPS16-202ENST00000380445 ACVR2BQ13705 512 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 SLC10A6Q3KNW5 377 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 DRICH1Q6PGQ1 229 aaPredicted RBP13.32□□□□□ -0.28
VPS16-202ENST00000380445 POLNQ7Z5Q5 900 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 PLEKHH3Q7Z736 793 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 OR6J1Q8NGC5 347 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 SLITRK1Q96PX8 696 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 HERPUD2Q9BSE4 406 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 ROPN1BQ9BZX4 212 aaPredicted RBP13.32□□□□□ -0.28
VPS16-202ENST00000380445 FAM107BQ9H098 131 aa13.32□□□□□ -0.28
VPS16-202ENST00000380445 ROPN1Q9HAT0 212 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms