RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ALDH1A1P00352 501 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 ITGB3P05106 788 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 FLT3P36888 993 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 RPL21P46778 160 aaKnown RBP24.47■■□□□ 1.51
VPS16-201ENST00000380443 KLF1Q13351 362 aaPredicted RBP24.47■■□□□ 1.51
VPS16-201ENST00000380443 PPP1R7Q15435 360 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 C2CD6Q53TS8 623 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 SCARA5Q6ZMJ2 495 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 WDTC1Q8N5D0 677 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 GCOM2Q9BZD3 368 aaPredicted RBP24.47■■□□□ 1.51
VPS16-201ENST00000380443 DCLK3Q9C098 648 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 ZMYND15Q9H091 742 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 POLIQ9UNA4 740 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 NRCAMQ92823 1304 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 ERICH4A6NGS2 130 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 NUDT17P0C025 328 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 HSPA1AP0DMV8 641 aaKnown RBP24.46■■□□□ 1.51
VPS16-201ENST00000380443 HSPA1BP0DMV9 641 aaKnown RBP24.46■■□□□ 1.51
VPS16-201ENST00000380443 PTPN7P35236 360 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 RAD23BP54727 409 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 LMNB2Q03252 620 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 CALCOCO2Q13137 446 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 ZNF394Q53GI3 561 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 LLGL2Q6P1M3 1020 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 NPLOC4Q8TAT6 608 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 FNIP1Q8TF40 1166 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 CPB2Q96IY4 423 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 CAPS2Q9BXY5 557 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 OSBPL8Q9BZF1 889 aa24.46■■□□□ 1.51
VPS16-201ENST00000380443 PABPC3Q9H361 631 aaKnown RBP24.46■■□□□ 1.51
VPS16-201ENST00000380443 CILPO75339 1184 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 CD19P15391 556 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 ITIH2P19823 946 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 PMS2P54278 862 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 TAS2R40P59535 323 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 ZNF844Q08AG5 666 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 MAP2K5Q13163 448 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 PTK6Q13882 451 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 MORN1Q5T089 497 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 IFNL1Q8IU54 200 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 CCDC50Q8IVM0 306 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 FBXO25Q8TCJ0 367 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 TMEM176AQ96HP8 235 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 SAGE1Q9NXZ1 904 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 SMIM35A0A1B0GVV1 85 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 SIGLEC16A6NMB1 481 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 VDRP11473 427 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 PTPN11Q06124 597 aaPredicted RBP24.45■■□□□ 1.5
VPS16-201ENST00000380443 ZNF268Q14587 947 aaPredicted RBP24.45■■□□□ 1.5
VPS16-201ENST00000380443 ZSCAN26Q16670 478 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 BBOF1Q8ND07 529 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 HPDLQ96IR7 371 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 MIS12Q9H081 205 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 ATP8A1Q9Y2Q0 1164 aa24.45■■□□□ 1.5
VPS16-201ENST00000380443 KAT6AQ92794 2004 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 MEFVO15553 781 aaPredicted RBP24.44■■□□□ 1.5
VPS16-201ENST00000380443 HMGCRP04035 888 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 RALAP11233 206 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 SSTR3P32745 418 aaPredicted RBP24.44■■□□□ 1.5
VPS16-201ENST00000380443 INCA1Q0VD86 236 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 STILQ15468 1287 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 CNGA2Q16280 664 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 POLNQ7Z5Q5 900 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 HOOK3Q86VS8 718 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 SLC4A11Q8NBS3 891 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 TSPAN18Q96SJ8 248 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 ADAMTS10Q9H324 1103 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 DPP3Q9NY33 737 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 USTQ9Y2C2 406 aa24.44■■□□□ 1.5
VPS16-201ENST00000380443 F2P00734 622 aa24.43■■□□□ 1.5
VPS16-201ENST00000380443 AXLP30530 894 aa24.43■■□□□ 1.5
VPS16-201ENST00000380443 SSR1P43307 286 aaKnown RBP24.43■■□□□ 1.5
VPS16-201ENST00000380443 RPL7AP62424 266 aaKnown RBP24.43■■□□□ 1.5
VPS16-201ENST00000380443 DENND1BQ6P3S1 775 aa24.43■■□□□ 1.5
VPS16-201ENST00000380443 C1orf54Q8WWF1 131 aa24.43■■□□□ 1.5
VPS16-201ENST00000380443 MCEEQ96PE7 176 aa24.43■■□□□ 1.5
VPS16-201ENST00000380443 BARX2Q9UMQ3 279 aaPredicted RBP24.43■■□□□ 1.5
VPS16-201ENST00000380443 GNEQ9Y223 722 aaKnown RBP24.43■■□□□ 1.5
VPS16-201ENST00000380443 RARGP13631 454 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 KCNJ1P48048 391 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 KRT17Q04695 432 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 NFX1Q12986 1120 aaKnown RBP24.42■■□□□ 1.5
VPS16-201ENST00000380443 ACAP1Q15027 740 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 DRICH1Q6PGQ1 229 aaPredicted RBP24.42■■□□□ 1.5
VPS16-201ENST00000380443 CCHCR1Q8TD31 782 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 RNF186Q9NXI6 227 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 AGAP1Q9UPQ3 857 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 Q9Y3F1 56 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 MBLAC1A4D2B0 266 aaPredicted RBP24.42■■□□□ 1.5
VPS16-201ENST00000380443 CSDE1O75534 798 aaKnown RBP24.42■■□□□ 1.5
VPS16-201ENST00000380443 TJP3O95049 919 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 NR1D1P20393 614 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 GABRB2P47870 512 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 IFFO1Q0D2I5 559 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 MYO1EQ12965 1108 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 DENND2CQ68D51 928 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 SLC27A1Q6PCB7 646 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 CEP128Q6ZU80 1094 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 SNF8Q96H20 258 aa24.42■■□□□ 1.5
VPS16-201ENST00000380443 SDCBP2Q9H190 292 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms