RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 TNFAIP3P21580 790 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 MAGEA10P43363 369 aaPredicted RBP29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 SPOUT1Q5T280 376 aaKnown RBP29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 SMYD5Q6GMV2 418 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 ZBED2Q9BTP6 218 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 SEPT11Q9NVA2 429 aaKnown RBP29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 STXBP5LQ9Y2K9 1186 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 PCDHA13Q9Y5I0 950 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 MRPL42Q9Y6G3 142 aaKnown RBP29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 DDX3XO00571 662 aaKnown RBP eCLIP29.52■■■□□ 2.323e-16■■■■■ 51.2
TRAPPC10-202ENST00000380221 THAP12O43422 761 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 PAEPP09466 180 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 BRD2P25440 801 aaKnown RBP29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 SSTR3P32745 418 aaPredicted RBP29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 ALDH7A1P49419 539 aaKnown RBP29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 GNG11P61952 73 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 FMO1Q01740 532 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 CDR2Q01850 454 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 ZNF662Q6ZS27 426 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 VPS36Q86VN1 386 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 UNC93AQ86WB7 457 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 TMEM86AQ8N2M4 240 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 ZNF606Q8WXB4 792 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 TFAP2BQ92481 460 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 ZSWIM1Q9BR11 485 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 DPEP3Q9H4B8 488 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 DNAI1Q9UI46 699 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 TFR2Q9UP52 801 aa29.52■■■□□ 2.32
TRAPPC10-202ENST00000380221 GABRDO14764 452 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 FAM163BP0C2L3 166 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 CD19P15391 556 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 VAV2P52735 878 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 HTRA4P83105 476 aaPredicted RBP29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 BMS1Q14692 1282 aaKnown RBP29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 SLC18A3Q16572 532 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 ACOT1Q86TX2 421 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 HERC6Q8IVU3 1022 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 SLC30A5Q8TAD4 765 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 HEXIM2Q96MH2 286 aaKnown RBP29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 SLC9A7Q96T83 725 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 IRX2Q9BZI1 471 aaPredicted RBP29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 PAXBP1Q9Y5B6 917 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 TSC2P49815 1807 aa29.51■■■□□ 2.31
TRAPPC10-202ENST00000380221 CFHP08603 1231 aa29.5■■■□□ 2.31
TRAPPC10-202ENST00000380221 ATP2A2P16615 1042 aaKnown RBP29.5■■■□□ 2.31
TRAPPC10-202ENST00000380221 C9orf50Q5SZB4 431 aa29.5■■■□□ 2.31
TRAPPC10-202ENST00000380221 PALB2Q86YC2 1186 aa29.5■■■□□ 2.31
TRAPPC10-202ENST00000380221 BCL7CQ8WUZ0 217 aaPredicted RBP29.5■■■□□ 2.31
TRAPPC10-202ENST00000380221 MTIF3Q9H2K0 278 aaKnown RBP29.5■■■□□ 2.31
TRAPPC10-202ENST00000380221 KIF5CO60282 957 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 CYP11A1P05108 521 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 CCDC122Q5T0U0 273 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 ZNF677Q86XU0 584 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 PCDHB18PQ96TA0 734 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 LPIN3Q9BQK8 851 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 GPR62Q9BZJ7 368 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 DDX43Q9NXZ2 648 aaKnown RBP29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 TRIM10Q9UDY6 481 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 PCDHB8Q9UN66 801 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 FAM170AA1A519 330 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 RCCD1A6NED2 376 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 TRAPPC3O43617 180 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 ACAT1P24752 427 aaKnown RBP29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 ANXA13P27216 316 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 MAGEA1P43355 309 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 RASIP1Q5U651 963 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 KCNT2Q6UVM3 1135 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 C12orf29Q8N999 325 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 PHOSPHO2Q8TCD6 241 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 INSL6Q9Y581 213 aa29.49■■■□□ 2.31
TRAPPC10-202ENST00000380221 TKTP29401 623 aaKnown RBP29.48■■■□□ 2.31
TRAPPC10-202ENST00000380221 LHX1P48742 406 aa29.48■■■□□ 2.31
TRAPPC10-202ENST00000380221 METTL23Q86XA0 190 aa29.48■■■□□ 2.31
TRAPPC10-202ENST00000380221 LACRTQ9GZZ8 138 aa29.48■■■□□ 2.31
TRAPPC10-202ENST00000380221 NAGPAQ9UK23 515 aa29.48■■■□□ 2.31
TRAPPC10-202ENST00000380221 DSEQ9UL01 958 aa29.48■■■□□ 2.31
TRAPPC10-202ENST00000380221 GUCA1BQ9UMX6 200 aa29.48■■■□□ 2.31
TRAPPC10-202ENST00000380221 KRT86O43790 486 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 FUT10Q6P4F1 479 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 WDR24Q96S15 920 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 LAMA2P24043 3122 aaKnown RBP29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 ARHGEF37A1IGU5 675 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 VDRP11473 427 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 TYMPP19971 482 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 KIF5AQ12840 1032 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 FAM171A1Q5VUB5 890 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 DNAAF5Q86Y56 855 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 ZNF558Q96NG5 402 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 RTP3Q9BQQ7 232 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 TSGA10Q9BZW7 698 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 PDCL3Q9H2J4 239 aa29.47■■■□□ 2.31
TRAPPC10-202ENST00000380221 SF3B1O75533 1304 aaKnown RBP eCLIP29.46■■■□□ 2.318e-6■■■■■ 107
TRAPPC10-202ENST00000380221 ATP2C2O75185 946 aa29.46■■■□□ 2.31
TRAPPC10-202ENST00000380221 PSMC1P62191 440 aaKnown RBP29.46■■■□□ 2.31
TRAPPC10-202ENST00000380221 SGO2Q562F6 1265 aa29.46■■■□□ 2.31
TRAPPC10-202ENST00000380221 KIAA0319Q5VV43 1072 aa29.46■■■□□ 2.31
TRAPPC10-202ENST00000380221 OVOS1Q6IE37 1185 aa29.46■■■□□ 2.31
TRAPPC10-202ENST00000380221 ALKBH5Q6P6C2 394 aaKnown RBP29.46■■■□□ 2.31
TRAPPC10-202ENST00000380221 CRYBG2Q8N1P7 616 aa29.46■■■□□ 2.31
TRAPPC10-202ENST00000380221 RAD9AQ99638 391 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms