RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 NFU1Q9UMS0 254 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 TRPV2Q9Y5S1 764 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 MICAL2O94851 1124 aa21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 HSPA6P17066 643 aa21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 SMC1AQ14683 1233 aaKnown RBP21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 CNGA2Q16280 664 aa21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 PPP2R5EQ16537 467 aa21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 SERINC5Q86VE9 423 aa21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 SLC13A5Q86YT5 568 aaPredicted RBP21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 KLHDC9Q8NEP7 349 aa21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 UBXN6Q9BZV1 441 aa21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 IP6K2Q9UHH9 426 aa21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.03■□□□□ 0.96
PDLIM5-205ENST00000380180 TCRBV7S2A1N4TA0A589 114 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 TTI1O43156 1089 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 KCNE1P15382 129 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 KCTD19Q17RG1 926 aaPredicted RBP21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 SGO2Q562F6 1265 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 PPP1R15BQ5SWA1 713 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 DPH6Q7L8W6 267 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 REM2Q8IYK8 340 aaPredicted RBP21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 ARRDC4Q8NCT1 418 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 DDX27Q96GQ7 796 aaKnown RBP21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 MCEEQ96PE7 176 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 MRPL45Q9BRJ2 306 aaKnown RBP21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 PLVAPQ9BX97 442 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 NT5C1AQ9BXI3 368 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 TJP2Q9UDY2 1190 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 STRIP2Q9ULQ0 834 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 USTQ9Y2C2 406 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 BHMG1C9JSJ3 638 aaPredicted RBP21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 O00370 1275 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 CHRNA1P02708 482 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 HMGCRP04035 888 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 CTSHP09668 335 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 TAS2R40P59535 323 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 DCUN1D2Q6PH85 259 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 SND1Q7KZF4 910 aaKnown RBP eCLIP21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 PRELID2Q8N945 189 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 C3orf20Q8ND61 904 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 ZBTB9Q96C00 473 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 CPXM1Q96SM3 734 aa21.02■□□□□ 0.96
PDLIM5-205ENST00000380180 PIRO00625 290 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 RPS6KA5O75582 802 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 TRPA1O75762 1119 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 CD4P01730 458 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 MAN1A1P33908 653 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 PAK2Q13177 524 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 CCSAPQ6IQ19 270 aaPredicted RBP21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 EMBQ6PCB8 327 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 RHOT1Q8IXI2 618 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 C18orf8Q96DM3 657 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 VIPAS39Q9H9C1 493 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 KIAA1257Q9ULG3 409 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 ST3GAL5Q9UNP4 418 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 GRIN2DO15399 1336 aa21.01■□□□□ 0.95
PDLIM5-205ENST00000380180 M0QYV0 167 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 GPD2P43304 727 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 OGDHQ02218 1023 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 TAP1Q03518 808 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 ZNF252P-AS1Q0IIN9 211 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 NFX1Q12986 1120 aaKnown RBP21■□□□□ 0.95
PDLIM5-205ENST00000380180 LLGL1Q15334 1064 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 C12orf29Q8N999 325 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 TSPAN18Q96SJ8 248 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 SENP6Q9GZR1 1112 aaPredicted RBP21■□□□□ 0.95
PDLIM5-205ENST00000380180 ST7Q9NRC1 585 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 SRRDQ9UH36 339 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 PSTPIP1O43586 416 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 XPOTO43592 962 aaKnown RBP21■□□□□ 0.95
PDLIM5-205ENST00000380180 PHF2O75151 1096 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 ATF7P17544 494 aaPredicted RBP21■□□□□ 0.95
PDLIM5-205ENST00000380180 SSR1P43307 286 aaKnown RBP21■□□□□ 0.95
PDLIM5-205ENST00000380180 SOX4Q06945 474 aaPredicted RBP21■□□□□ 0.95
PDLIM5-205ENST00000380180 SIX1Q15475 284 aaPredicted RBP21■□□□□ 0.95
PDLIM5-205ENST00000380180 FBXO47Q5MNV8 452 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 SESTD1Q86VW0 696 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 UBA3Q8TBC4 463 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 CD99L2Q8TCZ2 262 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 GOLGA2P5Q9HBQ8 144 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 HPCAL4Q9UM19 191 aa21■□□□□ 0.95
PDLIM5-205ENST00000380180 GOLGA8SH3BPF8 625 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 FSCN2O14926 492 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 FAM153BP0C7A2 387 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 RARAP10276 462 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 CYP3A5P20815 502 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 CST5P28325 142 aaPredicted RBP20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 PSMC1P62191 440 aaKnown RBP20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 DR1Q01658 176 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 SOWAHAQ2M3V2 549 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 FAM153CQ494X1 144 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 LCLAT1Q6UWP7 414 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 DDX42Q86XP3 938 aaKnown RBP eCLIP20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 CAVIN3Q969G5 261 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 MAGOHBQ96A72 148 aaKnown RBP20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 FAM153AQ9UHL3 310 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 MTUS1Q9ULD2 1270 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 NME7Q9Y5B8 376 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms