RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ASIC3Q9UHC3 531 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 CYTH4Q9UIA0 394 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 SCINQ9Y6U3 715 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 ZSWIM8A7E2V4 1837 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 KAT6AQ92794 2004 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 A0A087WZ62 844 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 NDUFAB1O14561 156 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 B4GALT4O60513 344 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 VTNP04004 478 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 LGALS2P05162 132 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 SLCO1A2P46721 670 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 EIF3BP55884 814 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 IFI35P80217 286 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 DENND1BQ6P3S1 775 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 RHBDF2Q6PJF5 856 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 USP50Q70EL3 339 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 C1orf127Q8N9H9 656 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 EPS8L3Q8TE67 593 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 SGSM3Q96HU1 749 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 CCDC114Q96M63 670 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 RUNDC3BQ96NL0 473 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 FDXACB1Q9BRP7 624 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 SYT17Q9BSW7 474 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ERAP1Q9NZ08 941 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 HMGXB4Q9UGU5 601 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 DNAH12Q6ZR08 3092 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 LACTBL1A8MY62 500 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 RARGP13631 454 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ADORA2AP29274 412 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ADCYAP1R1P41586 468 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 SLC26A2P50443 739 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 CALCOCO2Q13137 446 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 TFDP1Q14186 410 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 WDR72Q3MJ13 1102 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 KAZNQ674X7 775 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 AFG1LQ8WV93 481 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ANKRD36BP1Q96IX9 119 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 TWNKQ96RR1 684 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 CDC42EP4Q9H3Q1 356 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 RPF1Q9H9Y2 349 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 WHRNQ9P202 907 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 TNFSF13BQ9Y275 285 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 NEU2Q9Y3R4 380 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 CITO14578 2027 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 A6NNZ2 444 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 E7EVH7 732 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 TNNC2P02585 160 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 STAG3L1P0CL83 205 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 GBP1P32455 592 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ITGA8P53708 1063 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 SNAPC2Q13487 334 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 PTK6Q13882 451 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 SURF1Q15526 300 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF792Q3KQV3 632 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 TUBB8Q3ZCM7 444 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 LDLRAD1Q5T700 205 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 JADE1Q6IE81 842 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 MFSD7Q6UXD7 560 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ARMC9Q7Z3E5 817 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 EXOC8Q8IYI6 725 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 C10orf67Q8IYJ2 551 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 GLIS1Q8NBF1 620 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ATL2Q8NHH9 583 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 EXD1Q8NHP7 514 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 CXorf38Q8TB03 319 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 UCN2Q96RP3 112 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 CCT8L2Q96SF2 557 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 FAM107BQ9H098 131 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF408Q9H9D4 720 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 IP6K2Q9UHH9 426 aa8.43□□□□□ -1.06
PDLIM5-204ENST00000380176 ASB14A6NK59 587 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 EBAG9O00559 213 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 LSM8O95777 96 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ITGB3P05106 788 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 CD19P15391 556 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 PSMC4P43686 418 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 RAD23BP54727 409 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 NFX1Q12986 1120 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 DSG2Q14126 1118 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 PTPN20Q4JDL3 420 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ZFYVE27Q5T4F4 411 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 DNAJC24Q6P3W2 148 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 DCUN1D2Q6PH85 259 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 NLRP14Q86W24 1093 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ERICH1Q86X53 443 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ARFGAP2Q8N6H7 521 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 TMEM35BQ8NCS4 154 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 MYCBPAPQ8TBZ2 947 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF473Q8WTR7 871 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 PPP1R13LQ8WUF5 828 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 MAIP1Q8WWC4 291 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 RAPGEF5Q92565 580 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 SLC10A4Q96EP9 437 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 SNF8Q96H20 258 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 SLITRK1Q96PX8 696 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 JPH2Q9BR39 696 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 SMYD3Q9H7B4 428 aa8.42□□□□□ -1.06
PDLIM5-204ENST00000380176 PCDHGC3Q9UN70 934 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms