RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 ECHS1P30084 290 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 HOXC8P31273 242 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 MAN1A1P33908 653 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 GJC1P36383 396 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 GJA9P57773 515 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 INCA1Q0VD86 236 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 ZBTB6Q15916 424 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 CYP4F22Q6NT55 531 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 TTC27Q6P3X3 843 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 CCDC137Q6PK04 289 aaKnown RBP15.94■□□□□ 0.14
SNX2-201ENST00000379516 CXCL17Q6UXB2 119 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 ALKAL1Q6UXT8 129 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 FAM71BQ8TC56 605 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 MTG1Q9BT17 334 aaPredicted RBP15.94■□□□□ 0.14
SNX2-201ENST00000379516 CNTN3Q9P232 1028 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 TMEM88BA6NKF7 163 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 AGPSO00116 658 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 FSCN2O14926 492 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 SYF2O95926 243 aaKnown RBP15.94■□□□□ 0.14
SNX2-201ENST00000379516 TAP1Q03518 808 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 SIX1Q15475 284 aaPredicted RBP15.94■□□□□ 0.14
SNX2-201ENST00000379516 SGO2Q562F6 1265 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 JAMLQ86YT9 394 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 CCDC50Q8IVM0 306 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 C3orf20Q8ND61 904 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 SEC14L1Q92503 715 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 ERP44Q9BS26 406 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 NEUROG2Q9H2A3 272 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 SYNCQ9H7C4 482 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 SPC25Q9HBM1 224 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 FAM114A2Q9NRY5 505 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 KLK14Q9P0G3 267 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 TJP2Q9UDY2 1190 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 PARP2Q9UGN5 583 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 RASAL2Q9UJF2 1139 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 SNX9Q9Y5X1 595 aa15.94■□□□□ 0.14
SNX2-201ENST00000379516 GOLGA8SH3BPF8 625 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 M0QYV0 167 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 PSMC1P62191 440 aaKnown RBP15.93■□□□□ 0.14
SNX2-201ENST00000379516 CNGA2Q16280 664 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 CYP1B1Q16678 543 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 PPP1R15BQ5SWA1 713 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 TAF2Q6P1X5 1199 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 CCDC105Q8IYK2 499 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 TTC39CQ8N584 583 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 RIN2Q8WYP3 895 aaPredicted RBP15.93■□□□□ 0.14
SNX2-201ENST00000379516 CPXM1Q96SM3 734 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 NT5C1AQ9BXI3 368 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 RNF39Q9H2S5 420 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 VPS18Q9P253 973 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 PCYOX1Q9UHG3 505 aa15.93■□□□□ 0.14
SNX2-201ENST00000379516 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNX2-201ENST00000379516 HSF2BPO75031 334 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 COILP38432 576 aaPredicted RBP15.92■□□□□ 0.14
SNX2-201ENST00000379516 PTGIRP43119 386 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 GYS2P54840 703 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 PRKCZQ05513 592 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 ZNF252P-AS1Q0IIN9 211 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 TRIM32Q13049 653 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 NBPF20Q3BBV1 942 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 UBXN11Q5T124 520 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 FAM124BQ9H5Z6 455 aaPredicted RBP15.92■□□□□ 0.14
SNX2-201ENST00000379516 LCMT1Q9UIC8 334 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 UBQLN1Q9UMX0 589 aaKnown RBP15.92■□□□□ 0.14
SNX2-201ENST00000379516 FAN1Q9Y2M0 1017 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 F8VP50 259 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 ALDH1A1P00352 501 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 HMGCRP04035 888 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 RARBP10826 455 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 KRT3P12035 628 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 OGDHQ02218 1023 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 TERF2Q15554 542 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 C9orf57Q5W0N0 161 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 ALS2CLQ60I27 953 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 DUPD1Q68J44 220 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 KATNAL2Q8IYT4 538 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 LRRC52Q8N7C0 313 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 UBA3Q8TBC4 463 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 MAIP1Q8WWC4 291 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 C1orf54Q8WWF1 131 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 HHIPL1Q96JK4 782 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 MRPL45Q9BRJ2 306 aaKnown RBP15.92■□□□□ 0.14
SNX2-201ENST00000379516 HEMGNQ9BXL5 484 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 GTF2IRD1Q9UHL9 959 aa15.92■□□□□ 0.14
SNX2-201ENST00000379516 SMIM28A0A1B0GU29 152 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 M0QZ92 97 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 CITO14578 2027 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 RALAP11233 206 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 GPD2P43304 727 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 KCNJ1P48048 391 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 PIGHQ14442 188 aaPredicted RBP15.91■□□□□ 0.14
SNX2-201ENST00000379516 FAM47CQ5HY64 1035 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 ZFYVE27Q5T4F4 411 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 TWF2Q6IBS0 349 aaKnown RBP15.91■□□□□ 0.14
SNX2-201ENST00000379516 SESTD1Q86VW0 696 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 MREGQ8N565 214 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 C12orf29Q8N999 325 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 C12orf50Q8NA57 414 aaPredicted RBP15.91■□□□□ 0.14
SNX2-201ENST00000379516 SMC1BQ8NDV3 1235 aa15.91■□□□□ 0.14
SNX2-201ENST00000379516 RUNDC3BQ96NL0 473 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms