RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ECE2O60344 883 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 CYP2E1P05181 493 aaPredicted RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 SCP2P22307 547 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ADD2P35612 726 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 PLOD1Q02809 727 aaPredicted RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 SERAC1Q96JX3 654 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 RMND5AQ9H871 391 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 SEC24DO94855 1032 aaPredicted RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ALBP02768 609 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ARFIP2P53365 341 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 SPTLC3Q9NUV7 552 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 FAM47DPA6NHR8 397 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 NUDT14O95848 222 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 TGFBR2P37173 567 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 RXRGP48443 463 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 DGKDQ16760 1214 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 REXO4Q9GZR2 422 aaKnown RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 CCDC177Q9NQR7 707 aaPredicted RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 INTS13Q9NVM9 706 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 HSPA9P38646 679 aaKnown RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 MAPK9P45984 424 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 DSG4Q86SJ6 1040 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 MICU2Q8IYU8 434 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 DSEQ9UL01 958 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 PAIP2BQ9ULR5 123 aaKnown RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 HOXA2O43364 376 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 AKAP10O43572 662 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 COG2Q14746 738 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 PCSK7Q16549 785 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 TRPM8Q7Z2W7 1104 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ANKARQ7Z5J8 1434 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 LGALS16A8MUM7 142 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 TRIM24O15164 1050 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 VPS26AO75436 327 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 SPAG6O75602 509 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 EIF3EP60228 445 aaKnown RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 WLSQ5T9L3 541 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ECSITQ9BQ95 431 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 HEMGNQ9BXL5 484 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 USP1O94782 785 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 GPSM2P81274 684 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF177Q13360 481 aaPredicted RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 TMEM237Q96Q45 408 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 CTNNAL1Q9UBT7 734 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 AP3D1O14617 1153 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ENO1P06733 434 aaKnown RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 TBC1D25Q3MII6 688 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 CNPP09543 421 aaKnown RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ATP12AP54707 1039 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 GRAMD1AQ96CP6 724 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 FAM20AQ96MK3 541 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 POLBP06746 335 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 UBE2SQ16763 222 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 SWSAP1Q6NVH7 229 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 AGAP3Q96P47 875 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 A0A088AWK7 358 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF10P21506 573 aaPredicted RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ARSEP51690 589 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 PPP2R2AP63151 447 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 PAGE5Q96GU1 130 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 MAGOHP61326 146 aaKnown RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 CAMK1Q14012 370 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 PABPC5Q96DU9 382 aaKnown RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 SH3BP4Q9P0V3 963 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 TAF4O00268 1085 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 C2CD2LO14523 706 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 SIK3Q9Y2K2 1263 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 H3BMM5 538 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 RPTNQ6XPR3 784 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 VPS33AQ96AX1 596 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 YME1L1Q96TA2 773 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ING3Q9NXR8 418 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ZFYVE16Q7Z3T8 1539 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 SOWAHDA6NJG2 315 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ERVV-1B6SEH8 477 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 MMP1P03956 469 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 MAGEA10P43363 369 aaPredicted RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 RBP5P82980 135 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 CYLC2Q14093 348 aaPredicted RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 TAF1CQ15572 869 aaPredicted RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ATAD3BQ5T9A4 648 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 SH3GL1Q99961 368 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 AP4S1Q9Y587 144 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 MYO7BQ6PIF6 2116 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 C6orf222P0C671 652 aaPredicted RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 THTPAQ9BU02 230 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 PSMD7P51665 324 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms