RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TRIM43Q96BQ3 446 aaPredicted RBP26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 CYFIP2Q96F07 1278 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 IRX2Q9BZI1 471 aaPredicted RBP26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 PRKAG2Q9UGJ0 569 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 GTF3C4Q9UKN8 822 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 STXBP5LQ9Y2K9 1186 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 KIAA0100Q14667 2235 aaKnown RBP26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 CAPN15O75808 1086 aa26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 CALCAP01258 141 aa26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 EN2P19622 333 aaPredicted RBP26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 ABCB4P21439 1286 aa26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 PHF13Q86YI8 300 aaPredicted RBP26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 COLGALT2Q8IYK4 626 aa26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 CRYBG2Q8N1P7 616 aa26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 MSANTD4Q8NCY6 345 aa26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 CASD1Q96PB1 797 aa26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 TDRD15B5MCY1 1934 aaKnown RBP26.09■■□□□ 1.77
ECHDC3-201ENST00000379215 C1QBPQ07021 282 aaKnown RBP26.08■■□□□ 1.77
ECHDC3-201ENST00000379215 METTL23Q86XA0 190 aa26.08■■□□□ 1.77
ECHDC3-201ENST00000379215 SLC35F6Q8N357 371 aa26.08■■□□□ 1.77
ECHDC3-201ENST00000379215 C3orf58Q8NDZ4 430 aa26.08■■□□□ 1.77
ECHDC3-201ENST00000379215 THAP2Q9H0W7 228 aa26.08■■□□□ 1.77
ECHDC3-201ENST00000379215 SCN5AQ14524 2016 aa26.08■■□□□ 1.77
ECHDC3-201ENST00000379215 CTAGE9A4FU28 777 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 O00370 1275 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 GABRDO14764 452 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 BAIAP3O94812 1187 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 NOP2P46087 812 aaKnown RBP26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 LIN9Q5TKA1 542 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 ARHGAP17Q68EM7 881 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 LCLAT1Q6UWP7 414 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 PASD1Q8IV76 773 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 LRRC43Q8N309 656 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 ZNF653Q96CK0 615 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 WDR24Q96S15 920 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 ZSWIM1Q9BR11 485 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 AVENQ9NQS1 362 aaPredicted RBP26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 PCDHGC5Q9Y5F6 944 aa26.07■■□□□ 1.76
ECHDC3-201ENST00000379215 M0QZQ0 153 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 TRAPPC3O43617 180 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 AMHP03971 560 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 CALB1P05937 261 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 HADHBP55084 474 aaKnown RBP26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 MCOLN2Q8IZK6 566 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 CPA5Q8WXQ8 436 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 SUSD3Q96L08 255 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 PAAF1Q9BRP4 392 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 TMEM175Q9BSA9 504 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 UVRAGQ9P2Y5 699 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 TTC3P53804 2025 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 DDHD2O94830 711 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 MOCS3O95396 460 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 CYP11A1P05108 521 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 CYP1A2P05177 515 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 ORC1Q13415 861 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 TIGD5Q53EQ6 642 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 WSCD1Q658N2 575 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 MON1BQ7L1V2 547 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 ACOT1Q86TX2 421 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 ZNF280BQ86YH2 543 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 SYCE1Q8N0S2 351 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 NAPGQ99747 312 aaPredicted RBP26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 ADAM22Q9P0K1 906 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 CACNG4Q9UBN1 327 aa26.06■■□□□ 1.76
ECHDC3-201ENST00000379215 BUB1O43683 1085 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 KIF4AO95239 1232 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 CSF2RAP15509 400 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 TYMPP19971 482 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 PCSK1P29120 753 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 UBE2Q2Q8WVN8 375 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 MIS12Q9H081 205 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 HESX1Q9UBX0 185 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 SALL4Q9UJQ4 1053 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 STRIP2Q9ULQ0 834 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 JRKLQ9Y4A0 524 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 CAPN6Q9Y6Q1 641 aa26.05■■□□□ 1.76
ECHDC3-201ENST00000379215 M0QYV0 167 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 MTA2O94776 668 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 MICAL2O94851 1124 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 SETSIPP0DME0 302 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 MMP8P22894 467 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 OR1G1P47890 313 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 C1orf131Q8NDD1 294 aaKnown RBP26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 SLC35G2Q8TBE7 412 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 COLEC11Q9BWP8 271 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 IL23AQ9NPF7 189 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 CTTNBP2NLQ9P2B4 639 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 CNOT8Q9UFF9 292 aaKnown RBP26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 TSPAN16Q9UKR8 245 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 TET1Q8NFU7 2136 aa26.04■■□□□ 1.76
ECHDC3-201ENST00000379215 MICAL3Q7RTP6 2002 aa26.03■■□□□ 1.76
ECHDC3-201ENST00000379215 TBKBP1A7MCY6 615 aa26.03■■□□□ 1.76
ECHDC3-201ENST00000379215 CFHP08603 1231 aa26.03■■□□□ 1.76
ECHDC3-201ENST00000379215 ITGB8P26012 769 aa26.03■■□□□ 1.76
ECHDC3-201ENST00000379215 PPIGQ13427 754 aaKnown RBP eCLIP26.03■■□□□ 1.76
ECHDC3-201ENST00000379215 DENND1BQ6P3S1 775 aa26.03■■□□□ 1.76
ECHDC3-201ENST00000379215 DNAAF5Q86Y56 855 aa26.03■■□□□ 1.76
ECHDC3-201ENST00000379215 B3GALNT2Q8NCR0 500 aa26.03■■□□□ 1.76
ECHDC3-201ENST00000379215 VWCEQ96DN2 955 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms