RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 GOLGA6L19H0YKK7 550 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 PES1O00541 588 aaKnown RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 TGM5O43548 720 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 ABLIM3O94929 683 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 ATF2P15336 505 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 ELF1P32519 619 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 ASPAP45381 313 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 ARPP19P56211 112 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 ZNF445P59923 1031 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 YWHAEP62258 255 aaKnown RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 MAPRE1Q15691 268 aaKnown RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 MIIPQ5JXC2 388 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 LIN9Q5TKA1 542 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 SPOPLQ6IQ16 392 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 CCDC149Q6ZUS6 474 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 UNC93AQ86WB7 457 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 OR6B3Q8NGW1 331 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 C2orf15Q8WU43 125 aaKnown RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 FAM81BQ96LP2 452 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 NT5C1BQ96P26 610 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 RTP3Q9BQQ7 232 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 ANP32EQ9BTT0 268 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 ZCWPW1Q9H0M4 648 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 UBE2ZQ9H832 354 aaPredicted RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 APOBEC3GQ9HC16 384 aaKnown RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 CBX8Q9HC52 389 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 GCNT4Q9P109 453 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 AFF4Q9UHB7 1163 aaKnown RBP12.74□□□□□ -0.37
PCNA-201ENST00000379143 FBXW11Q9UKB1 542 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 CDH9Q9ULB4 789 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 POLIQ9UNA4 740 aa12.74□□□□□ -0.37
PCNA-201ENST00000379143 WDR27A2RRH5 827 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 LRRC10BA6NIK2 292 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 A8MXQ7 604 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 LINC01565O15544 149 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 ADAM12O43184 909 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 GLP2RO95838 553 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 EPCAMP16422 314 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 MRPS5P82675 430 aaKnown RBP12.73□□□□□ -0.37
PCNA-201ENST00000379143 INCA1Q0VD86 236 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 KRT31Q15323 416 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 NFE2Q16621 373 aaPredicted RBP12.73□□□□□ -0.37
PCNA-201ENST00000379143 EXOC3L4Q17RC7 722 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 UVSSAQ2YD98 709 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
PCNA-201ENST00000379143 FKBP15Q5T1M5 1219 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 SCARA5Q6ZMJ2 495 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 KREMEN2Q8NCW0 462 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 OR10T2Q8NGX3 314 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 LMO3Q8TAP4 145 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 FAM122AQ96E09 287 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 TNIP3Q96KP6 325 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 MRPL45Q9BRJ2 306 aaKnown RBP12.73□□□□□ -0.37
PCNA-201ENST00000379143 HSD3B7Q9H2F3 369 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.377e-9■■■■■ 28.8
PCNA-201ENST00000379143 MAN1C1Q9NR34 630 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 ZDHHC7Q9NXF8 308 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 TAB2Q9NYJ8 693 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 HSFX1Q9UBD0 423 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 PLXNA3P51805 1871 aa12.73□□□□□ -0.37
PCNA-201ENST00000379143 LRRN2O75325 713 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 HOXA9P31269 272 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 CDH8P55286 799 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 GCNT1Q02742 428 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 ADCY1Q08828 1119 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 CUL2Q13617 745 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 SLC39A12Q504Y0 691 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 ANKRD54Q6NXT1 300 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 CYP26C1Q6V0L0 522 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 ENOSF1Q7L5Y1 443 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 LUZP1Q86V48 1076 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 TCEAL8Q8IYN2 117 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 PPM1KQ8N3J5 372 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 VN1R2Q8NFZ6 395 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 SPPL2BQ8TCT7 592 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 SYT15Q9BQS2 421 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 INTS2Q9H0H0 1204 aaKnown RBP12.72□□□□□ -0.37
PCNA-201ENST00000379143 VPS16Q9H269 839 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 SFXN1Q9H9B4 322 aa12.72□□□□□ -0.37
PCNA-201ENST00000379143 BARX2Q9UMQ3 279 aaPredicted RBP12.72□□□□□ -0.37
PCNA-201ENST00000379143 MTCL1Q9Y4B5 1905 aaKnown RBP12.72□□□□□ -0.37
PCNA-201ENST00000379143 PRRG1O14668 218 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 TBX10O75333 385 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 ZMYND10O75800 440 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 C8AP07357 584 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 PDGFRBP09619 1106 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 HNRNPA1P09651 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCNA-201ENST00000379143 WEE2P0C1S8 567 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms