RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 TMCO5AQ8N6Q1 288 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 CYP4F11Q9HBI6 524 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 EPB41L4AQ9HCS5 686 aaPredicted RBP11.42□□□□□ -0.58
LINC00654-201ENST00000379053 FAM32AQ9Y421 112 aaKnown RBP11.42□□□□□ -0.58
LINC00654-201ENST00000379053 KRT87PA6NCN2 255 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 M0QYT0 321 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 ABCE1P61221 599 aaKnown RBP11.42□□□□□ -0.58
LINC00654-201ENST00000379053 LRRC8EQ6NSJ5 796 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 ITIH5Q86UX2 942 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 PPP1R36Q96LQ0 422 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 MAGEB10Q96LZ2 347 aaPredicted RBP11.42□□□□□ -0.58
LINC00654-201ENST00000379053 THG1LQ9NWX6 298 aaKnown RBP11.42□□□□□ -0.58
LINC00654-201ENST00000379053 ADCY10Q96PN6 1610 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 SRGNP10124 158 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
LINC00654-201ENST00000379053 C1orf146Q5VVC0 180 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 ZFP42Q96MM3 310 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 BPIFA3Q9BQP9 254 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 BRD8Q9H0E9 1235 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 DSEQ9UL01 958 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 TBX20Q9UMR3 447 aa11.42□□□□□ -0.58
LINC00654-201ENST00000379053 OGTO15294 1046 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 NCAM2O15394 837 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 HERVK_113P62684 666 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 EXOSC10Q01780 885 aaKnown RBP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 HIBCHQ6NVY1 386 aaPredicted RBP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 DDX42Q86XP3 938 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 NT5DC4Q86YG4 428 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 PHACTR4Q8IZ21 702 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 C17orf75Q9HAS0 396 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SLC39A10Q9ULF5 831 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 PCDHB9Q9Y5E1 797 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 KDM4FA0A1W2PPD8 638 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 MTSS1O43312 755 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 ZNF286BP0CG31 522 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 CYP2C8P10632 490 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 UCHL3P15374 230 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 PPP4CP60510 307 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 MAGOHP61326 146 aaKnown RBP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 DHX34Q14147 1143 aaKnown RBP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SPATC1LQ9H0A9 340 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 RSAD1Q9HA92 442 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 LIMA1Q9UHB6 759 aaKnown RBP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 RHOBTB1O94844 696 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 ENDOD1O94919 500 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 RAP1GDS1P52306 607 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SGO1Q5FBB7 561 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SARM1Q6SZW1 724 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 STX19Q8N4C7 294 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SLC35G2Q8TBE7 412 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 HES6Q96HZ4 224 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 NFKBIZQ9BYH8 718 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SLC28A3Q9HAS3 691 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 VPS28Q9UK41 221 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SPACA6W5XKT8 324 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 MSH4O15457 936 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 MCF2P10911 925 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 AKR1A1P14550 325 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 INTS5Q6P9B9 1019 aaKnown RBP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 CSGALNACT1Q8TDX6 532 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 TASP1Q9H6P5 420 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 PITPNM2Q9BZ72 1349 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 ADM5C9JUS6 153 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 H2AFYO75367 372 aaKnown RBP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SOAT1P35610 550 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 FKBP1BP68106 108 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 EFEMP1Q12805 493 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SMTNL2Q2TAL5 461 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 ADGRF2Q8IZF7 708 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 SPATA18Q8TC71 538 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 BTN2A2Q8WVV5 523 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 OSMRQ99650 979 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 EMILIN2Q9BXX0 1053 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 NDE1Q9NXR1 346 aa11.41□□□□□ -0.58
LINC00654-201ENST00000379053 XPO7Q9UIA9 1087 aaKnown RBP11.41□□□□□ -0.58
LINC00654-201ENST00000379053 GALCP54803 685 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 OXCT1P55809 520 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ZNF284Q2VY69 593 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 EDRF1Q3B7T1 1238 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 TTLL9Q3SXZ7 439 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 NAPEPLDQ6IQ20 393 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 CPB2Q96IY4 423 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 SETD4Q9NVD3 440 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ARHGAP26Q9UNA1 814 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 MYPNQ86TC9 1320 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 SLC12A8A0AV02 714 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 H3BRB1 525 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 CXCL11O14625 94 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 CHUKO15111 745 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 PMPCBO75439 489 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 PTK6Q13882 451 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 PLCL1Q15111 1095 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 MPZL3Q6UWV2 235 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 CATSPER3Q86XQ3 398 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 PNKPQ96T60 521 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 TUT1Q9H6E5 874 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 376 ms