RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 MMP8P22894 467 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 LILRA4P59901 499 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 LIN9Q5TKA1 542 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 LLGL2Q6P1M3 1020 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 RSRC2Q7L4I2 434 aaKnown RBP18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 UBXN4Q92575 508 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 PGBD4Q96DM1 585 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 LHX5Q9H2C1 402 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 TMEM51Q9NW97 253 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 PDE2AO00408 941 aaPredicted RBP18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 SELPP16109 830 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 BFSP2Q13515 415 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 MESDQ14696 234 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 SGO2Q562F6 1265 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 ECHDC2Q86YB7 292 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 GOLGA1Q92805 767 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 HES6Q96HZ4 224 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 BTBD6Q96KE9 485 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 RGS18Q9NS28 235 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 CACNG4Q9UBN1 327 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 NME7Q9Y5B8 376 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 ALG6Q9Y672 507 aa18.62■□□□□ 0.57
LYSMD4-203ENST00000378904 TMEM110-MUSTN1A8MSY1 372 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 TEX35Q5T0J7 233 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 RTN4RL1Q86UN2 441 aaPredicted RBP18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 OR6B3Q8NGW1 331 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 UBXN6Q9BZV1 441 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 KIAA1257Q9ULG3 409 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 O00370 1275 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 KCNK3O14649 394 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 MICAL2O94851 1124 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 CNGA2Q16280 664 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 DPH6Q7L8W6 267 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 ZNF598Q86UK7 904 aaKnown RBP18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 UNC93AQ86WB7 457 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 APPL2Q8NEU8 664 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 KBTBD7Q8WVZ9 684 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 UBN1Q9NPG3 1134 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 CALCOCO1Q9P1Z2 691 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 L1RE1Q9UN81 338 aa18.61■□□□□ 0.57
LYSMD4-203ENST00000378904 CALB1P05937 261 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 CCDC181Q5TID7 509 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 PLEKHA7Q6IQ23 1121 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 LIMS2Q7Z4I7 341 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 ACOT1Q86TX2 421 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 ERICH1Q86X53 443 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 C12orf29Q8N999 325 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 EHD2Q9NZN4 543 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 ANAPC7Q9UJX3 599 aa18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.6■□□□□ 0.57
LYSMD4-203ENST00000378904 A8MXQ7 604 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 C9IYK1 514 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 M0QYV0 167 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 ATP8B1O43520 1251 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 PQBP1O60828 265 aaKnown RBP18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 HUS1O60921 280 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 POMCP01189 267 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 COMTP21964 271 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 IGFBP6P24592 240 aaPredicted RBP18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 CLCNKBP51801 687 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 LINC01599Q8WXQ3 324 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 MS4A14Q96JA4 679 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 MRPL47Q9HD33 250 aaKnown RBP18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 SMARCAL1Q9NZC9 954 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 CYTH4Q9UIA0 394 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 SCINQ9Y6U3 715 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 PODXLO00592 558 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 CES2O00748 559 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 DDX3YO15523 660 aaKnown RBP18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 FGFR1P11362 822 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 ATN1P54259 1190 aaPredicted RBP18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 MAMLD1Q13495 774 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 SLC24A5Q71RS6 500 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 TOP6BLQ8N6T0 577 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 PBKQ96KB5 322 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 RPGRIP1Q96KN7 1286 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 TRIM7Q9C029 511 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 RNF14Q9UBS8 474 aa18.59■□□□□ 0.57
LYSMD4-203ENST00000378904 CASTOR2A6NHX0 329 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 HCRTO43612 131 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 NBNO60934 754 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 GNL1P36915 607 aaPredicted RBP18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 PAFAH1B1P43034 410 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 MNX1P50219 401 aaPredicted RBP18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 C1QTNF8P60827 252 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 CFAP221Q4G0U5 840 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 PTPN20Q4JDL3 420 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 LCLAT1Q6UWP7 414 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 ZNF572Q7Z3I7 529 aaPredicted RBP18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 CRISPLD2Q9H0B8 497 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 SNX25Q9H3E2 840 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 DPEP3Q9H4B8 488 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 PARVAQ9NVD7 372 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 ARGLU1Q9NWB6 273 aaPredicted RBP18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 TSPAN16Q9UKR8 245 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 INPP5FQ9Y2H2 1132 aa18.58■□□□□ 0.57
LYSMD4-203ENST00000378904 TULP2O00295 520 aa18.58■□□□□ 0.56
LYSMD4-203ENST00000378904 PITPNM1O00562 1244 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms