RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CES5AQ6NT32 575 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 SPATA31D4Q6ZUB0 917 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 OSTM1Q86WC4 334 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 TTC39CQ8N584 583 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 MRPL45Q9BRJ2 306 aaKnown RBP14.16□□□□□ -0.14
CKAP2-202ENST00000378034 PI4K2AQ9BTU6 479 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 ADAM7Q9H2U9 754 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 KCNJ18B7U540 433 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 C8AP07357 584 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 ASPAP45381 313 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 ADCY1Q08828 1119 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 KCNJ12Q14500 433 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 MAPRE1Q15691 268 aaKnown RBP14.16□□□□□ -0.14
CKAP2-202ENST00000378034 ZSCAN23Q3MJ62 389 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 TCP11X2Q5H9J9 407 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 INTS6LQ5JSJ4 861 aaKnown RBP14.16□□□□□ -0.14
CKAP2-202ENST00000378034 CDKAL1Q5VV42 579 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 RNF19BQ6ZMZ0 732 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 OR6B3Q8NGW1 331 aa14.16□□□□□ -0.14
CKAP2-202ENST00000378034 APOBEC3GQ9HC16 384 aaKnown RBP14.16□□□□□ -0.14
CKAP2-202ENST00000378034 SAMSN1Q9NSI8 373 aaKnown RBP14.16□□□□□ -0.14
CKAP2-202ENST00000378034 BRWD1Q9NSI6 2320 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 GTPBP10A4D1E9 387 aaKnown RBP14.15□□□□□ -0.14
CKAP2-202ENST00000378034 SMTNL1A8MU46 457 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 PRRG1O14668 218 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 OR4Q2P0C623 313 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 TFF2Q03403 129 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 SLC39A12Q504Y0 691 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 PPM1LQ5SGD2 360 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 UNC93AQ86WB7 457 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 EHBP1Q8NDI1 1231 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.15□□□□□ -0.14
CKAP2-202ENST00000378034 SPPL2BQ8TCT7 592 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 RIPOR3Q96MK2 946 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 ASB2Q96Q27 587 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 TMEM209Q96SK2 561 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 TUBGCP2Q9BSJ2 902 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 DNAI2Q9GZS0 605 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 SMYD3Q9H7B4 428 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 CYP4F11Q9HBI6 524 aa14.15□□□□□ -0.14
CKAP2-202ENST00000378034 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 MTMR11A4FU01 709 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 A8MXQ7 604 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 MBTPS2O43462 519 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 TRIM21P19474 475 aaKnown RBP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 LMO2P25791 158 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 MTHFRP42898 656 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 RARS2Q5T160 578 aaKnown RBP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 PTCRAQ6ISU1 281 aaPredicted RBP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 FAM171BQ6P995 826 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 GPR149Q86SP6 731 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 LRRTM3Q86VH5 581 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 ANKRD20A12PQ8NF67 263 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 SLC7A14Q8TBB6 771 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 TNIP3Q96KP6 325 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 NECTIN4Q96NY8 510 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 PKMYT1Q99640 499 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 SYT15Q9BQS2 421 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 PRKD2Q9BZL6 878 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 ABCB6Q9NP58 842 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 FANCLQ9NW38 375 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 COL6A3P12111 3177 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 GRXCR2A6NFK2 248 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 XYLBO75191 536 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 SEC24AO95486 1093 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 TPM2P07951 284 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 TBXAS1P24557 533 aaPredicted RBP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 ACAT1P24752 427 aaKnown RBP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 TUFMP49411 452 aaKnown RBP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 ZNF165P49910 485 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 CDH8P55286 799 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 INCA1Q0VD86 236 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 PLD1Q13393 1074 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 NCAPHQ15003 741 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 CLUL1Q15846 466 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 VWA3BQ502W6 1294 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 ATAT1Q5SQI0 421 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 SCARA5Q6ZMJ2 495 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 C12orf76Q8N812 135 aaPredicted RBP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 LMO3Q8TAP4 145 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 SUSD6Q92537 303 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 FUBP3Q96I24 572 aaKnown RBP eCLIP14.14□□□□□ -0.15
CKAP2-202ENST00000378034 NT5C1BQ96P26 610 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 SDCBP2Q9H190 292 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 NDST4Q9H3R1 872 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 PCDHB5Q9Y5E4 795 aa14.14□□□□□ -0.15
CKAP2-202ENST00000378034 LRRN2O75325 713 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 VNN2O95498 520 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 LRG1P02750 347 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 PDGFRBP09619 1106 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 YWHAEP62258 255 aaKnown RBP14.13□□□□□ -0.15
CKAP2-202ENST00000378034 SMAD2Q15796 467 aaKnown RBP14.13□□□□□ -0.15
CKAP2-202ENST00000378034 TMC5Q6UXY8 1006 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 C4orf50Q6ZRC1 276 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 AOPEPQ8N6M6 819 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 MYCBPAPQ8TBZ2 947 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 PGLYRP2Q96PD5 576 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 GTF3C4Q9UKN8 822 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms