RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 LIMS2Q7Z4I7 341 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 DNAJB7Q7Z6W7 309 aaPredicted RBP15.31■□□□□ 0.04
CLCN6-203ENST00000376490 SUGP1Q8IWZ8 645 aaKnown RBP15.31■□□□□ 0.04
CLCN6-203ENST00000376490 ADGRF2Q8IZF7 708 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 TMEM174Q8WUU8 243 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 ERCC4Q92889 916 aaPredicted RBP15.31■□□□□ 0.04
CLCN6-203ENST00000376490 ZSWIM3Q96MP5 696 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 SEPT5Q99719 369 aaPredicted RBP15.31■□□□□ 0.04
CLCN6-203ENST00000376490 KXD1Q9BQD3 176 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 ACBD6Q9BR61 282 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 ASAH2Q9NR71 780 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 ABI2Q9NYB9 513 aaPredicted RBP15.31■□□□□ 0.04
CLCN6-203ENST00000376490 GDE1Q9NZC3 331 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 HSFX1Q9UBD0 423 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 GTF3C4Q9UKN8 822 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 FBXL21Q9UKT6 434 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 TRAF3IP3Q9Y228 551 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
CLCN6-203ENST00000376490 LRRIQ3A6PVS8 624 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-203ENST00000376490 ATP2C2O75185 946 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 MICAL2O94851 1124 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 KIF20AO95235 890 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 HAPLN1P10915 354 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-203ENST00000376490 SRFP11831 508 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 LMO2P25791 158 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 AVPR2P30518 371 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 LHX1P48742 406 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 VCPP55072 806 aaKnown RBP15.3■□□□□ 0.04
CLCN6-203ENST00000376490 MYL6P60660 151 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 GPC5P78333 572 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 MYL7Q01449 175 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 TSPY1Q01534 308 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 SMARCB1Q12824 385 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 TANGO2Q6ICL3 276 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 SMYD4Q8IYR2 804 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-203ENST00000376490 GUF1Q8N442 669 aaKnown RBP15.3■□□□□ 0.04
CLCN6-203ENST00000376490 FAM200AQ8TCP9 573 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 SPPL2BQ8TCT7 592 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 GPR152Q8TDT2 470 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 NUP210Q8TEM1 1887 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-203ENST00000376490 GIPC2Q8TF65 315 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 C2orf15Q8WU43 125 aaKnown RBP15.3■□□□□ 0.04
CLCN6-203ENST00000376490 KBTBD7Q8WVZ9 684 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 CCDC34Q96HJ3 373 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 MMS19Q96T76 1030 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 LPIN3Q9BQK8 851 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 PI4K2AQ9BTU6 479 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 PLA2G2FQ9BZM2 168 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 ZNF334Q9HCZ1 680 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-203ENST00000376490 WNT16Q9UBV4 365 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 ASB3Q9Y575 518 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 PCDHB5Q9Y5E4 795 aa15.3■□□□□ 0.04
CLCN6-203ENST00000376490 MYBPHLA2RUH7 354 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 PHACTR2O75167 634 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 GADD45BO75293 160 aaPredicted RBP15.29■□□□□ 0.04
CLCN6-203ENST00000376490 C4BPAP04003 597 aaKnown RBP15.29■□□□□ 0.04
CLCN6-203ENST00000376490 PDGFRBP09619 1106 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 NPR3P17342 541 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 ATF6P18850 670 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 CLDN10P78369 228 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 TRPC3Q13507 836 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 TEAD2Q15562 447 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 CCDC142Q17RM4 750 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 WDR72Q3MJ13 1102 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 INTS6LQ5JSJ4 861 aaKnown RBP15.29■□□□□ 0.04
CLCN6-203ENST00000376490 FAM78AQ5JUQ0 283 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
CLCN6-203ENST00000376490 TMC8Q8IU68 726 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 SIX5Q8N196 739 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 LEMD2Q8NC56 503 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 SHKBP1Q8TBC3 707 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 SPATA18Q8TC71 538 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 PSMG2Q969U7 264 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 ELMO3Q96BJ8 720 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 PKMYT1Q99640 499 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 MFSD1Q9H3U5 465 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 CIZ1Q9ULV3 898 aaPredicted RBP15.29■□□□□ 0.04
CLCN6-203ENST00000376490 CA14Q9ULX7 337 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 FRMD4BQ9Y2L6 1034 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 PCDHA5Q9Y5H7 936 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 MIA3Q5JRA6 1907 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 TICRRQ7Z2Z1 1910 aa15.29■□□□□ 0.04
CLCN6-203ENST00000376490 KIF26AQ9ULI4 1882 aaPredicted RBP15.29■□□□□ 0.04
CLCN6-203ENST00000376490 A0A1W2PRU2 124 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 KRBA1A5PL33 1030 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 WARSP23381 471 aaKnown RBP15.28■□□□□ 0.04
CLCN6-203ENST00000376490 NR2F2P24468 414 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 CYP2F1P24903 491 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 GPR15P49685 360 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 BIRC3Q13489 604 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 NFE2Q16621 373 aaPredicted RBP15.28■□□□□ 0.04
CLCN6-203ENST00000376490 GAREM2Q75VX8 874 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 GPIHBP1Q8IV16 184 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 FLCNQ8NFG4 579 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 MRPL45Q9BRJ2 306 aaKnown RBP15.28■□□□□ 0.04
CLCN6-203ENST00000376490 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
CLCN6-203ENST00000376490 SLC2A4RGQ9NR83 387 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms