RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 GPRASP2Q96D09 838 aa16.02■□□□□ 0.15
MSH5-203ENST00000375750 SPATC1LQ9H0A9 340 aa16.02■□□□□ 0.15
MSH5-203ENST00000375750 NPHS2Q9NP85 383 aa16.02■□□□□ 0.15
MSH5-203ENST00000375750 KMT5AQ9NQR1 393 aa16.02■□□□□ 0.15
MSH5-203ENST00000375750 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.02■□□□□ 0.15
MSH5-203ENST00000375750 WDR64B1ANS9 1081 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 CXCL11O14625 94 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 KCNA2P16389 499 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 GNAZP19086 355 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 TUBP50607 506 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 MKRN3Q13064 507 aaKnown RBP16.01■□□□□ 0.15
MSH5-203ENST00000375750 MAMLD1Q13495 774 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 SETDB1Q15047 1291 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 MAP1SQ66K74 1059 aaPredicted RBP16.01■□□□□ 0.15
MSH5-203ENST00000375750 CAPRIN2Q6IMN6 1127 aaKnown RBP16.01■□□□□ 0.15
MSH5-203ENST00000375750 SYDE1Q6ZW31 735 aaPredicted RBP16.01■□□□□ 0.15
MSH5-203ENST00000375750 ANO5Q75V66 913 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 MON1BQ7L1V2 547 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 CCDC89Q8N998 374 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 YIPF3Q9GZM5 350 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 MAP3K13O43283 966 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 IFNB1P01574 187 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 MAPTP10636 758 aaKnown RBP16.01■□□□□ 0.15
MSH5-203ENST00000375750 ACOT2P49753 483 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 SESN3P58005 492 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 SP2Q02086 613 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 CAV1Q03135 178 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 ACVR2BQ13705 512 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 MAPK6Q16659 721 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 MFSD7Q6UXD7 560 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 OTOAQ7RTW8 1153 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 ZCCHC9Q8N567 271 aaKnown RBP16.01■□□□□ 0.15
MSH5-203ENST00000375750 PRR11Q96HE9 360 aaPredicted RBP16.01■□□□□ 0.15
MSH5-203ENST00000375750 NAF1Q96HR8 494 aaKnown RBP16.01■□□□□ 0.15
MSH5-203ENST00000375750 TXNRD2Q9NNW7 524 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 TXLNGQ9NUQ3 528 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 PAPPA2Q9BXP8 1791 aa16.01■□□□□ 0.15
MSH5-203ENST00000375750 HNRNPDLO14979 420 aaKnown RBP16■□□□□ 0.15
MSH5-203ENST00000375750 KRT76Q01546 638 aa16■□□□□ 0.15
MSH5-203ENST00000375750 CENPCQ03188 943 aa16■□□□□ 0.15
MSH5-203ENST00000375750 ALCAMQ13740 583 aa16■□□□□ 0.15
MSH5-203ENST00000375750 Q3C1V9 767 aa16■□□□□ 0.15
MSH5-203ENST00000375750 SEZ6Q53EL9 994 aa16■□□□□ 0.15
MSH5-203ENST00000375750 RIOX2Q8IUF8 465 aa16■□□□□ 0.15
MSH5-203ENST00000375750 RHOT1Q8IXI2 618 aa16■□□□□ 0.15
MSH5-203ENST00000375750 C10orf82Q8WW14 230 aa16■□□□□ 0.15
MSH5-203ENST00000375750 BICD1Q96G01 975 aa16■□□□□ 0.15
MSH5-203ENST00000375750 MFSD14AQ96MC6 490 aa16■□□□□ 0.15
MSH5-203ENST00000375750 NUDCD1Q96RS6 583 aa16■□□□□ 0.15
MSH5-203ENST00000375750 MOV10L1Q9BXT6 1211 aaKnown RBP16■□□□□ 0.15
MSH5-203ENST00000375750 LRMDAQ9H2I8 198 aa16■□□□□ 0.15
MSH5-203ENST00000375750 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
MSH5-203ENST00000375750 STARD13Q9Y3M8 1113 aa16■□□□□ 0.15
MSH5-203ENST00000375750 C2orf71A6NGG8 1288 aa16■□□□□ 0.15
MSH5-203ENST00000375750 TLR3O15455 904 aaKnown RBP16■□□□□ 0.15
MSH5-203ENST00000375750 EDF1O60869 148 aaKnown RBP16■□□□□ 0.15
MSH5-203ENST00000375750 CNMDO75829 334 aa16■□□□□ 0.15
MSH5-203ENST00000375750 GJA5P36382 358 aa16■□□□□ 0.15
MSH5-203ENST00000375750 PSMC5P62195 406 aa16■□□□□ 0.15
MSH5-203ENST00000375750 LVRNQ6Q4G3 990 aa16■□□□□ 0.15
MSH5-203ENST00000375750 TMEM270Q6UE05 265 aa16■□□□□ 0.15
MSH5-203ENST00000375750 MTDHQ86UE4 582 aaKnown RBP16■□□□□ 0.15
MSH5-203ENST00000375750 MAP4K3Q8IVH8 894 aa16■□□□□ 0.15
MSH5-203ENST00000375750 RFWD2Q8NHY2 731 aa16■□□□□ 0.15
MSH5-203ENST00000375750 PLCD4Q9BRC7 762 aa16■□□□□ 0.15
MSH5-203ENST00000375750 TMEM121Q9BTD3 319 aa16■□□□□ 0.15
MSH5-203ENST00000375750 DENND2DQ9H6A0 471 aaPredicted RBP16■□□□□ 0.15
MSH5-203ENST00000375750 RNPEPL1Q9HAU8 725 aa16■□□□□ 0.15
MSH5-203ENST00000375750 C1orf112Q9NSG2 853 aa16■□□□□ 0.15
MSH5-203ENST00000375750 KCNH4Q9UQ05 1017 aa16■□□□□ 0.15
MSH5-203ENST00000375750 USH1CQ9Y6N9 552 aa16■□□□□ 0.15
MSH5-203ENST00000375750 MAPK13O15264 365 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 MAFGO15525 162 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 LIASO43766 372 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 LINGO3P0C6S8 592 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 TPBGLP0DKB5 382 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 ADRA1DP25100 572 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 MAN1A1P33908 653 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 JAK3P52333 1124 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 NFX1Q12986 1120 aaKnown RBP15.99■□□□□ 0.15
MSH5-203ENST00000375750 PPIL2Q13356 520 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 SPARCL1Q14515 664 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 ZBTB41Q5SVQ8 909 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 LRRC8CQ8TDW0 803 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 MAIP1Q8WWC4 291 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 RAB3IPQ96QF0 476 aaPredicted RBP15.99■□□□□ 0.15
MSH5-203ENST00000375750 OSBPL1AQ9BXW6 950 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 APOBEC3GQ9HC16 384 aaKnown RBP15.99■□□□□ 0.15
MSH5-203ENST00000375750 GABBR1Q9UBS5 961 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 AGTPBP1Q9UPW5 1226 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 PCDHA10Q9Y5I2 948 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 IVNS1ABPQ9Y6Y0 642 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 IQCA1LA6NCM1 817 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 F8VP50 259 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 PMM2O15305 246 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 HLA-DRAP01903 254 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 KRT4P19013 534 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 TNNI1P19237 187 aa15.99■□□□□ 0.15
MSH5-203ENST00000375750 SSTR1P30872 391 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms