RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 DDX56Q9NY93 547 aaKnown RBP15.35■□□□□ 0.05
MSH5-201ENST00000375703 PHTF1Q9UMS5 762 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ADAMTS5Q9UNA0 930 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 STARD13Q9Y3M8 1113 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ASS1P00966 412 aaKnown RBP15.34■□□□□ 0.05
MSH5-201ENST00000375703 MSH2P43246 934 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 PDIA2Q13087 525 aaKnown RBP15.34■□□□□ 0.05
MSH5-201ENST00000375703 CCDC142Q17RM4 750 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 RNASEH2BQ5TBB1 312 aaKnown RBP15.34■□□□□ 0.05
MSH5-201ENST00000375703 C4orf33Q8N1A6 199 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 UBR7Q8N806 425 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 TCHPQ9BT92 498 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 SENP1Q9P0U3 644 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 TCRBV5S1A1TA0A578 114 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 ANP32DO95626 131 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 LSM8O95777 96 aaKnown RBP15.34■□□□□ 0.05
MSH5-201ENST00000375703 ITGAVP06756 1048 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 RPSAP08865 295 aaKnown RBP15.34■□□□□ 0.05
MSH5-201ENST00000375703 TNFSF9P41273 254 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 CDKN2BP42772 138 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 SLC18A1P54219 525 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 STXBP2Q15833 593 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 ZBTB33Q86T24 672 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 ERICH1Q86X53 443 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 SCYL3Q8IZE3 742 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 FBF1Q8TES7 1133 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 JDP2Q8WYK2 163 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 PRCCQ92733 491 aaPredicted RBP15.34■□□□□ 0.05
MSH5-201ENST00000375703 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 EBF2Q9HAK2 575 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 PICK1Q9NRD5 415 aa15.34■□□□□ 0.05
MSH5-201ENST00000375703 SMG5Q9UPR3 1016 aaKnown RBP15.34■□□□□ 0.05
MSH5-201ENST00000375703 ARID2Q68CP9 1835 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 WDR81Q562E7 1941 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 CCNB1P14635 433 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 PTPRAP18433 802 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 RPA3P35244 121 aaPredicted RBP15.33■□□□□ 0.05
MSH5-201ENST00000375703 SKIV2L2P42285 1042 aaKnown RBP15.33■□□□□ 0.05
MSH5-201ENST00000375703 AP3M2P53677 418 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 MYL6P60660 151 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 TAP1Q03518 808 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 SETDB1Q15047 1291 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 GPAT2Q6NUI2 795 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 NKD2Q969F2 451 aaPredicted RBP15.33■□□□□ 0.05
MSH5-201ENST00000375703 NIFKQ9BYG3 293 aaKnown RBP15.33■□□□□ 0.05
MSH5-201ENST00000375703 CISHQ9NSE2 258 aa15.33■□□□□ 0.05
MSH5-201ENST00000375703 A8MUI8 341 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 GOLGA8SH3BPF8 625 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 GOLGA8MH3BSY2 632 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 NDC80O14777 642 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 UNC5CO95185 931 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 CA4P22748 312 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 CCND1P24385 295 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 GBP2P32456 591 aaPredicted RBP15.33■□□□□ 0.04
MSH5-201ENST00000375703 PTPN7P35236 360 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 ANKMY2Q8IV38 441 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 WDTC1Q8N5D0 677 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 ANKLE1Q8NAG6 615 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 SPOCK2Q92563 424 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 ADAM33Q9BZ11 813 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 ZNF518BQ9C0D4 1074 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 PDGFDQ9GZP0 370 aaPredicted RBP15.33■□□□□ 0.04
MSH5-201ENST00000375703 ETNK1Q9HBU6 452 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 PCDH9Q9HC56 1237 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 SHOC2Q9UQ13 582 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 KIAA1217Q5T5P2 1943 aa15.33■□□□□ 0.04
MSH5-201ENST00000375703 A0A1W2PPM1 405 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 ADCY3O60266 1144 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 ZNF280AP59817 542 aaPredicted RBP15.32■□□□□ 0.04
MSH5-201ENST00000375703 PPP1R15BQ5SWA1 713 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 CYP4A22Q5TCH4 519 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 TLDC1Q6P9B6 456 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 SAMD7Q7Z3H4 446 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 VSIG1Q86XK7 387 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 WDR49Q8IV35 697 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 BRSK2Q8IWQ3 736 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 LRRC8CQ8TDW0 803 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 L3MBTL3Q96JM7 780 aaPredicted RBP15.32■□□□□ 0.04
MSH5-201ENST00000375703 MTMR12Q9C0I1 747 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 MYLK2Q9H1R3 596 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 SLCO1B3Q9NPD5 702 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 NRBP2Q9NSY0 501 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 SLC24A2Q9UI40 661 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 AGTPBP1Q9UPW5 1226 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 USH1CQ9Y6N9 552 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 DOCK5Q9H7D0 1870 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 WEE2P0C1S8 567 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 EIF4BP23588 611 aaKnown RBP15.32■□□□□ 0.04
MSH5-201ENST00000375703 MYO1EQ12965 1108 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 CAPSQ13938 189 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 SLC1A5Q15758 541 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 PDK4Q16654 411 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 SGSM1Q2NKQ1 1148 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 HHATQ5VTY9 493 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 DCAF15Q66K64 600 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 PCGF5Q86SE9 256 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 TXLNGQ9NUQ3 528 aa15.32■□□□□ 0.04
MSH5-201ENST00000375703 SAE1Q9UBE0 346 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms