RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 CHST7Q9NS84 486 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZDHHC7Q9NXF8 308 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KLK14Q9P0G3 267 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ANKFY1Q9P2R3 1169 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CAPN11Q9UMQ6 739 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SIK3Q9Y2K2 1263 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 VWA8A3KMH1 1905 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GTPBP10A4D1E9 387 aaKnown RBP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 OGTO15294 1046 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NRDCO43847 1150 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PAPLNO95428 1278 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NPTXRO95502 500 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GYPCP04921 128 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ADRB2P07550 413 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SP9P0CG40 484 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GLULP15104 373 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TRIM21P19474 475 aaKnown RBP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PROZP22891 400 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FSHRP23945 695 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 AXLP30530 894 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FMO5P49326 533 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ACOT2P49753 483 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KLK7P49862 253 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ADKP55263 362 aaKnown RBP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NTHL1P78549 312 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CETN1Q12798 172 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 EXOC3L4Q17RC7 722 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TSR1Q2NL82 804 aaKnown RBP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 USP41Q3LFD5 358 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 RTP2Q5QGT7 225 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DCLRE1AQ6PJP8 1040 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GSTCDQ8NEC7 633 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZNF397Q8NF99 534 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PJA1Q8NG27 643 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NEK11Q8NG66 645 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PARD3BQ8TEW8 1205 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 HDAC7Q8WUI4 952 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NXPE3Q969Y0 559 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 RPP25Q9BUL9 199 aaKnown RBP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SLC2A4RGQ9NR83 387 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FBXW11Q9UKB1 542 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ADAM28Q9UKQ2 775 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LUC7L2Q9Y383 392 aaKnown RBP11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SIT1Q9Y3P8 196 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SPTBN2O15020 2390 aa11.76□□□□□ -0.53
HLA-DQA1-202ENST00000374949 A0A1W2PQJ5 194 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TTC26A0AVF1 554 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ABLIM1O14639 778 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PMM2O15305 246 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 P4HA2O15460 535 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZMYND10O75800 440 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TRIM49P0CI25 452 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TRIM49CP0CI26 452 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MCF2P10911 925 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GTF2H1P32780 548 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DLG4P78352 724 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GRIK3Q13003 919 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NOLC1Q14978 699 aaKnown RBP eCLIP11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PSMD6Q15008 389 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SURF1Q15526 300 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KYAT1Q16773 422 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 C1orf220Q5T0J3 134 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LILRA6Q6PI73 481 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZC3H14Q6PJT7 736 aaKnown RBP11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PARM1Q6UWI2 310 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CRELD2Q6UXH1 353 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DGLUCYQ7Z3D6 616 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 APBB1IPQ7Z5R6 666 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GRASPQ7Z6J2 395 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 C1orf210Q8IVY1 113 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 DCLK2Q8N568 766 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TC2NQ8N9U0 490 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 EHBP1Q8NDI1 1231 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CCDC112Q8NEF3 446 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 OR8K1Q8NGG5 319 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PLEKHO2Q8TD55 490 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FGF14Q92915 247 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CCDC127Q96BQ5 260 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PAAF1Q9BRP4 392 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CRACR2AQ9BSW2 395 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LSM14BQ9BX40 385 aaKnown RBP11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SEMA4AQ9H3S1 761 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PLCB1Q9NQ66 1216 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FNIP2Q9P278 1114 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GIT1Q9Y2X7 761 aa11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SF3B1O75533 1304 aaKnown RBP eCLIP11.75□□□□□ -0.53
HLA-DQA1-202ENST00000374949 A0A1B0GUA9 196 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CASTOR2A6NHX0 329 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LRRIQ3A6PVS8 624 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 RNF225M0QZC1 329 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MFAP3LO75121 409 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TADA2AO75478 443 aa11.74□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KIF4AO95239 1232 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms