RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 MCM8Q9UJA3 840 aa5.69□□□□□ -1.5
PMS1-202ENST00000374826 ZBTB21Q9ULJ3 1066 aa5.69□□□□□ -1.5
PMS1-202ENST00000374826 CICQ96RK0 1608 aaPredicted RBP5.69□□□□□ -1.5
PMS1-202ENST00000374826 BCL9O00512 1426 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 KDM6AO15550 1401 aaPredicted RBP5.68□□□□□ -1.5
PMS1-202ENST00000374826 K7ESF4 209 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 OSMP13725 252 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 PTH2RP49190 550 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 MTNR1BP49286 362 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 SLC5A3P53794 718 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 PER3P56645 1201 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 PPP3CAQ08209 521 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 MALLQ13021 153 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 BMT2Q1RMZ1 405 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 DEFB132Q7Z7B7 95 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 FAM98AQ8NCA5 519 aaKnown RBP5.68□□□□□ -1.5
PMS1-202ENST00000374826 ZFP28Q8NHY6 868 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 ADI1Q9BV57 179 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 SPC25Q9HBM1 224 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 ALG13Q9NP73 1137 aaKnown RBP5.68□□□□□ -1.5
PMS1-202ENST00000374826 MRC1P22897 1456 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 CACNA1SQ13698 1873 aa5.68□□□□□ -1.5
PMS1-202ENST00000374826 CXorf49A8MYA2 514 aaPredicted RBP5.67□□□□□ -1.5
PMS1-202ENST00000374826 PJA2O43164 708 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 HLA-DOAP06340 250 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 U2AF1L5P0DN76 240 aaPredicted RBP5.67□□□□□ -1.5
PMS1-202ENST00000374826 RBP3P10745 1247 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 CXCR5P32302 372 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 SREBF1P36956 1147 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 ELLP55199 621 aaPredicted RBP5.67□□□□□ -1.5
PMS1-202ENST00000374826 CLRN1P58418 232 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 U2AF1Q01081 240 aaKnown RBP eCLIP5.67□□□□□ -1.5
PMS1-202ENST00000374826 SP140Q13342 867 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 NOMO1Q15155 1222 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 PDCD4Q53EL6 469 aaKnown RBP5.67□□□□□ -1.5
PMS1-202ENST00000374826 ZNF530Q6P9A1 599 aaPredicted RBP5.67□□□□□ -1.5
PMS1-202ENST00000374826 PQLC1Q8N2U9 271 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 FBXO18Q8NFZ0 1043 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 SLC35B2Q8TB61 432 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 NELL1Q92832 810 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 PCDHGA2Q9Y5H1 932 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 NUP98P52948 1817 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 PLEKHG2Q9H7P9 1386 aa5.67□□□□□ -1.5
PMS1-202ENST00000374826 COL24A1Q17RW2 1714 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 BCORQ6W2J9 1755 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 UNC119BA6NIH7 251 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 ANP32CO43423 234 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 ENDOD1O94919 500 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 ESRRBO95718 433 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 SNRPA1P09661 255 aaKnown RBP5.66□□□□□ -1.5
PMS1-202ENST00000374826 EGR2P11161 476 aaPredicted RBP5.66□□□□□ -1.5
PMS1-202ENST00000374826 PHKG2P15735 406 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 ALOX15P16050 662 aaPredicted RBP5.66□□□□□ -1.5
PMS1-202ENST00000374826 DDX6P26196 483 aaKnown RBP eCLIP5.66□□□□□ -1.5
PMS1-202ENST00000374826 PRKAR2BP31323 418 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 PLA2G5P39877 138 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 MPLP40238 635 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 MCAMP43121 646 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 BLOC1S1P78537 153 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 KLF1Q13351 362 aaPredicted RBP5.66□□□□□ -1.5
PMS1-202ENST00000374826 ATXN7L2Q5T6C5 722 aaPredicted RBP5.66□□□□□ -1.5
PMS1-202ENST00000374826 DDX42Q86XP3 938 aaKnown RBP eCLIP5.66□□□□□ -1.5
PMS1-202ENST00000374826 HOXB13Q92826 284 aaPredicted RBP5.66□□□□□ -1.5
PMS1-202ENST00000374826 ADAM2Q99965 735 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 SENP6Q9GZR1 1112 aaPredicted RBP5.66□□□□□ -1.5
PMS1-202ENST00000374826 LANCL2Q9NS86 450 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 NUDCQ9Y266 331 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 GPR45Q9Y5Y3 372 aa5.66□□□□□ -1.5
PMS1-202ENST00000374826 AFDNP55196 1824 aaKnown RBP5.66□□□□□ -1.5
PMS1-202ENST00000374826 SPATA31D3P0C874 917 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 RAP2AP10114 183 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 TP53BP2Q13625 1128 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 EZH2Q15910 746 aaKnown RBP5.65□□□□□ -1.5
PMS1-202ENST00000374826 CCDC184Q52MB2 194 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 PLEKHO1Q53GL0 409 aaPredicted RBP5.65□□□□□ -1.5
PMS1-202ENST00000374826 C1orf141Q5JVX7 400 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 AFMIDQ63HM1 303 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 SPATA31D4Q6ZUB0 917 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 AMOTL1Q8IY63 956 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 CNTD1Q8N815 330 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 BOLLQ8N9W6 283 aaKnown RBP5.65□□□□□ -1.5
PMS1-202ENST00000374826 LRFN3Q9BTN0 628 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 SLC5A4Q9NY91 659 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 MOCS1Q9NZB8 636 aa5.65□□□□□ -1.5
PMS1-202ENST00000374826 ATRNL1Q5VV63 1379 aa5.65□□□□□ -1.51
PMS1-202ENST00000374826 MAP3K5Q99683 1374 aa5.65□□□□□ -1.51
PMS1-202ENST00000374826 ANKRD36CQ5JPF3 1778 aa5.65□□□□□ -1.51
PMS1-202ENST00000374826 KCPQ6ZWJ8 1503 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 LRP5O75197 1615 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 DRGXA6NNA5 263 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 WNT10BO00744 389 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 AGXTP21549 392 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 GUCY1A2P33402 732 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 RAP2BP61225 183 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 MGAT2Q10469 447 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 RESTQ13127 1097 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 WDR43Q15061 677 aaKnown RBP eCLIP5.64□□□□□ -1.51
PMS1-202ENST00000374826 MTHFSDQ2M296 383 aaKnown RBP5.64□□□□□ -1.51
PMS1-202ENST00000374826 AMOTQ4VCS5 1084 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms