RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 NTSR2O95665 410 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 PEX11BO96011 259 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 PTMAP06454 111 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 FDPSP14324 419 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 HNRNPLP14866 589 aaKnown RBP eCLIP5.47□□□□□ -1.53
USP48-202ENST00000374730 MCM7P33993 719 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 HSPA1LP34931 641 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 KIR2DL3P43628 341 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 PHKA1P46020 1223 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 CRKLP46109 303 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 DGCR2P98153 550 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 KLF10Q13118 480 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 CRHR2Q13324 411 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 TUBA3CQ13748 450 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 RRP1BQ14684 758 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 C21orf62-AS1Q17RA5 79 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 SLC9C2Q5TAH2 1124 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 SUSD4Q5VX71 490 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 CNNM4Q6P4Q7 775 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 TUBA3EQ6PEY2 450 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 ESPNLQ6ZVH7 1005 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 KIAA0907Q7Z7F0 614 aaPredicted RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 UNC5BQ8IZJ1 945 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 TDRD7Q8NHU6 1098 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 BICD2Q8TD16 824 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 USP28Q96RU2 1077 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 UTP14AQ9BVJ6 771 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 TARS2Q9BW92 718 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 PIH1D3Q9NQM4 214 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 PARPBPQ9NWS1 579 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 DACT1Q9NYF0 836 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 CEP72Q9P209 647 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 HECAQ9UBI9 543 aaPredicted RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 PRKAB1Q9Y478 270 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 MRPL42Q9Y6G3 142 aaKnown RBP5.47□□□□□ -1.53
USP48-202ENST00000374730 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.47□□□□□ -1.53
USP48-202ENST00000374730 TAF1P21675 1872 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 PNPLA7Q6ZV29 1317 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 ZNF532Q9HCE3 1301 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 STK36Q9NRP7 1315 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 COL4A1P02462 1669 aa5.47□□□□□ -1.53
USP48-202ENST00000374730 SBF2Q86WG5 1849 aa5.46□□□□□ -1.53
USP48-202ENST00000374730 A0A0A6YYK5 440 aaPredicted RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 GOLGA6L6A8MZA4 724 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 CDKL5O76039 1030 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 YEATS4O95619 227 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 LSSP48449 732 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 HAND2P61296 217 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 CCT2P78371 535 aaKnown RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 TRDNQ13061 729 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 ITPK1Q13572 414 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 SART3Q15020 963 aaKnown RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 PCBP1Q15365 356 aaKnown RBP eCLIP5.46□□□□□ -1.54
USP48-202ENST00000374730 ELAVL1Q15717 326 aaKnown RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 CCDC152Q4G0S7 254 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 PLEKHG4Q58EX7 1191 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 DALRD3Q5D0E6 543 aaKnown RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 IGFL4Q6B9Z1 124 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 CLEC4GQ6UXB4 293 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 UNQ6494/PRO21346Q6UXR6 183 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 CCDC73Q6ZRK6 1079 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 CHST3Q7LGC8 479 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 TBC1D10CQ8IV04 446 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 DHX37Q8IY37 1157 aaKnown RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 CMTM4Q8IZR5 234 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 CDYL2Q8N8U2 506 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 ZNF610Q8N9Z0 462 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 SPATA5Q8NB90 893 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 ENGASEQ8NFI3 743 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 FBXO18Q8NFZ0 1043 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 PIBF1Q8WXW3 757 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 FERMT2Q96AC1 680 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 C8orf76Q96K31 380 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 UIMC1Q96RL1 719 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 STRBPQ96SI9 672 aaKnown RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 CDC5LQ99459 802 aaKnown RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 SOX7Q9BT81 388 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.46□□□□□ -1.54
USP48-202ENST00000374730 PCDHB6Q9Y5E3 794 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 BAZ2AQ9UIF9 1905 aaKnown RBP5.46□□□□□ -1.54
USP48-202ENST00000374730 DUOX1Q9NRD9 1551 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 ZNF804BA4D1E1 1349 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 MYPNQ86TC9 1320 aa5.46□□□□□ -1.54
USP48-202ENST00000374730 NRP1O14786 923 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 CPLX1O14810 134 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 AP5Z1O43299 807 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 KINO60870 393 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 IDH1O75874 414 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 IPO13O94829 963 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 PFKMP08237 780 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 GAAP10253 952 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 GNAT2P19087 354 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 LSP1P33241 339 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 IGHMBP2P38935 993 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 LIFRP42702 1097 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 MAN2A2P49641 1150 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 GPR15P49685 360 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 SCNN1BP51168 640 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 RCAN1P53805 252 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms