RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ANKEF1Q9NU02 776 aa14.84□□□□□ -0.03
LMX1B-202ENST00000373474 PPLO60437 1756 aa14.84□□□□□ -0.03
LMX1B-202ENST00000373474 ANGPT2O15123 496 aa14.83□□□□□ -0.03
LMX1B-202ENST00000373474 CTCFP49711 727 aaPredicted RBP14.83□□□□□ -0.03
LMX1B-202ENST00000373474 ARHGEF6Q15052 776 aa14.83□□□□□ -0.03
LMX1B-202ENST00000373474 CCDC103Q8IW40 242 aa14.83□□□□□ -0.03
LMX1B-202ENST00000373474 PDCD6IPQ8WUM4 868 aaKnown RBP14.83□□□□□ -0.03
LMX1B-202ENST00000373474 AFG1LQ8WV93 481 aa14.83□□□□□ -0.03
LMX1B-202ENST00000373474 KRT35Q92764 455 aa14.83□□□□□ -0.03
LMX1B-202ENST00000373474 ITGB1BP2Q9UKP3 347 aa14.83□□□□□ -0.03
LMX1B-202ENST00000373474 A0A087X0T9 212 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 MSH4O15457 936 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 FAM228BP0C875 321 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 RALAP11233 206 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 BTBD8Q5XKL5 378 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 RRM2BQ7LG56 351 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 LRRC34Q8IZ02 419 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 CAVIN3Q969G5 261 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 MED15Q96RN5 788 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 KDM4CQ9H3R0 1056 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 SARS2Q9NP81 518 aaKnown RBP14.83□□□□□ -0.04
LMX1B-202ENST00000373474 GTF3C4Q9UKN8 822 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 A0A0A6YYK5 440 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-202ENST00000373474 ZBTB22O15209 634 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 HMGCS2P54868 508 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 APPL2Q8NEU8 664 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 B4GALNT2Q8NHY0 566 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 SNRNP27Q8WVK2 155 aaKnown RBP14.83□□□□□ -0.04
LMX1B-202ENST00000373474 NSL1Q96IY1 281 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 BRD8Q9H0E9 1235 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 NEURL4Q96JN8 1562 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 TMEM191CA6NGB0 347 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 GOLGA8TH3BQL2 631 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
LMX1B-202ENST00000373474 OCM2P0CE71 109 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 OCMP0CE72 109 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-202ENST00000373474 CLK1P49759 484 aaKnown RBP14.83□□□□□ -0.04
LMX1B-202ENST00000373474 RGS7P49802 495 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 HSD17B4P51659 736 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 LAMB3Q13751 1172 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 COG2Q14746 738 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 TRIM65Q6PJ69 517 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 MOXD1Q6UVY6 613 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 PRUNE1Q86TP1 453 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 TRIM63Q969Q1 353 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 ZFYVE19Q96K21 471 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 GPBP1L1Q9HC44 474 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-202ENST00000373474 NWD1Q149M9 1564 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 H0YC42 278 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 AKAP10O43572 662 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 BNIP3LO60238 219 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 GPD1P21695 349 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 GTF2H1P32780 548 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 UBE3AQ05086 875 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 MEI1Q5TIA1 1274 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 OR6P1Q8NGX9 317 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 ASAP3Q8TDY4 903 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 C19orf60Q96EN9 201 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 PPP1R36Q96LQ0 422 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 COQ7Q99807 217 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 MRPL1Q9BYD6 325 aaKnown RBP14.83□□□□□ -0.04
LMX1B-202ENST00000373474 NSMCE4AQ9NXX6 385 aa14.83□□□□□ -0.04
LMX1B-202ENST00000373474 RSPH10B2B2RC85 870 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 MOCS2O96007 188 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 RSPH10BP0C881 870 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 SETD3Q86TU7 594 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 GINS4Q9BRT9 223 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 SIK2Q9H0K1 926 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 WHRNQ9P202 907 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 ZNF70Q9UC06 446 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 TBX20Q9UMR3 447 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 VWDEQ8N2E2 1590 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 UBA6A0AVT1 1052 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 C3orf70A6NLC5 250 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 SNUPNO95149 360 aaKnown RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 MYL2P10916 166 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 GPAT2Q6NUI2 795 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 MYCBPAPQ8TBZ2 947 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 FRMD8P1Q9BZ68 369 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 MED24O75448 989 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 MUTP22033 750 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 SEC23AQ15436 765 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 TRIP10Q15642 601 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 SPATA18Q8TC71 538 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 CYGBQ8WWM9 190 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 MAGEB18Q96M61 343 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 AFF2P51816 1311 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 H3BQF6 201 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 FOXD4Q12950 439 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-202ENST00000373474 NTRK3Q16288 839 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 SMIM5Q71RC9 77 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 RDM1Q8NG50 284 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 SH3TC2Q8TF17 1288 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 PI4K2AQ9BTU6 479 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 PARVBQ9HBI1 364 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 NOD2Q9HC29 1040 aa14.82□□□□□ -0.04
LMX1B-202ENST00000373474 SGPL1O95470 568 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms