RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 NFICP08651 508 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 SOX4Q06945 474 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-201ENST00000372447 RPS6KA1Q15418 735 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 LRIT3Q3SXY7 679 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 BEND6Q5SZJ8 279 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-201ENST00000372447 LMBRD2Q68DH5 695 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-201ENST00000372447 CCDC70Q6NSX1 233 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 C15orf39Q6ZRI6 1047 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 SLFN11Q7Z7L1 901 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 SYCE1Q8N0S2 351 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 TMEM130Q8N3G9 435 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 RFFLQ8WZ73 363 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 ZNF516Q92618 1163 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-201ENST00000372447 FAM84AQ96KN4 292 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 FNBP1Q96RU3 617 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 NRDE2Q9H7Z3 1164 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 TAS2R14Q9NYV8 317 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 SMARCAL1Q9NZC9 954 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 EHD2Q9NZN4 543 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 LINC01553A4QN01 128 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 ANKRD62A6NC57 917 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 CES2O00748 559 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 ZC3H11AO75152 810 aaKnown RBP eCLIP17.09■□□□□ 0.33
C9orf78-201ENST00000372447 SASH3O75995 380 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 DNA2P51530 1060 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
C9orf78-201ENST00000372447 DSC1Q08554 894 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 PALB2Q86YC2 1186 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 COLGALT2Q8IYK4 626 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 TAF4BQ92750 862 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 MS4A14Q96JA4 679 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 FUT8Q9BYC5 575 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 ABCB6Q9NP58 842 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 CACNG4Q9UBN1 327 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 DERAQ9Y315 318 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 C2CD2Q9Y426 696 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 PTPRJQ12913 1337 aa17.09■□□□□ 0.33
C9orf78-201ENST00000372447 KIF4AO95239 1232 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 ABCB4P21439 1286 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 TMEM132DQ14C87 1099 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 SURF1Q15526 300 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 RAB30Q15771 203 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 SLC35G2Q8TBE7 412 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 EPS8L1Q8TE68 723 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.33
C9orf78-201ENST00000372447 TSPAN18Q96SJ8 248 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 SLC38A7Q9NVC3 462 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 TUBGCP4Q9UGJ1 667 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 MSRAQ9UJ68 235 aa17.08■□□□□ 0.33
C9orf78-201ENST00000372447 NOCTQ9UK39 431 aaKnown RBP17.08■□□□□ 0.33
C9orf78-201ENST00000372447 UBQLN1Q9UMX0 589 aaKnown RBP17.08■□□□□ 0.33
C9orf78-201ENST00000372447 CASTOR2A6NHX0 329 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 CYP26A1O43174 497 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 TNNI1P19237 187 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 PBX3P40426 434 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 GUCY2FP51841 1108 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 TFAMQ00059 246 aaKnown RBP17.07■□□□□ 0.32
C9orf78-201ENST00000372447 GCNT1Q02742 428 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 TUSC3Q13454 348 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 ENOSF1Q7L5Y1 443 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 PEX26Q7Z412 305 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 SPRED2Q7Z698 418 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 NOP9Q86U38 636 aaKnown RBP17.07■□□□□ 0.32
C9orf78-201ENST00000372447 NT5DC4Q86YG4 428 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 OR5B17Q8NGF7 314 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 CLP1Q92989 425 aaKnown RBP17.07■□□□□ 0.32
C9orf78-201ENST00000372447 TATDN2Q93075 761 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 FAM81BQ96LP2 452 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 PAAF1Q9BRP4 392 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 THAP2Q9H0W7 228 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 ISCUQ9H1K1 167 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 GOLPH3Q9H4A6 298 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 OSGEPQ9NPF4 335 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 CDH23Q9H251 3354 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 C4BPAP04003 597 aaKnown RBP17.07■□□□□ 0.32
C9orf78-201ENST00000372447 CHRNB2P17787 502 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 DNAJB2P25686 324 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 ZACNQ401N2 412 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
C9orf78-201ENST00000372447 SCARA3Q6AZY7 606 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 DAAM2Q86T65 1068 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 SLC47A2Q86VL8 602 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 WDR49Q8IV35 697 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 CGRRF1Q99675 332 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 PI4K2AQ9BTU6 479 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 L1RE1Q9UN81 338 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 STXBP5LQ9Y2K9 1186 aa17.07■□□□□ 0.32
C9orf78-201ENST00000372447 ANK1P16157 1881 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 KCNK3O14649 394 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 FTLP02792 175 aaPredicted RBP17.06■□□□□ 0.32
C9orf78-201ENST00000372447 ALDH2P05091 517 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 GALTP07902 379 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 CYP11B1P15538 503 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 CYP3A5P20815 502 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms