RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TRAF3IP3Q9Y228 551 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 APOL1O14791 398 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 CYP11B2P19099 503 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 RGS7P49802 495 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 TPI1P60174 286 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 ST8SIA6P61647 398 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 NCAPHQ15003 741 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 SYDE1Q6ZW31 735 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 SOCS4Q8WXH5 440 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 STK33Q9BYT3 514 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 KCNQ5Q9NR82 932 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 TAF6LQ9Y6J9 622 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 TCP11X1B4DZS4 312 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 HOXA2O43364 376 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 CASP7P55210 303 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 CDH6P55285 790 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 GPS1Q13098 491 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 AGGF1Q8N302 714 aaeCLIP13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 RABL2AQ9UBK7 228 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 RBBP8NLQ8NC74 664 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 CARD9Q9H257 536 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 TBX20Q9UMR3 447 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 MROH1Q8NDA8 1641 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 TRIM66O15016 1216 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 STRNO43815 780 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 YY1P25490 414 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 MORF4L2Q15014 288 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 EDRF1Q3B7T1 1238 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 IZUMO3Q5VZ72 239 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 ZBED8Q8IZ13 594 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 SCG3Q8WXD2 468 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 VPS11Q9H270 941 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 WDR35Q9P2L0 1181 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 TTC7AQ9ULT0 858 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 ODC1P11926 461 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 TAF6P49848 677 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 AKR1D1P51857 326 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 HDAC4P56524 1084 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 PPM1NQ8N819 430 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 SLC26A7Q8TE54 656 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 TMEM8AQ9HCN3 771 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 AMACRQ9UHK6 382 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 SH3BP1Q9Y3L3 701 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 NFIBO00712 420 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 ZNF185O15231 689 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 DEAF1O75398 565 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 HMBSP08397 361 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 VIL1P09327 827 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 ARP10275 920 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 SFSWAPQ12872 951 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 ARHGAP15Q53QZ3 475 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 EXT2Q93063 718 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 IDI2Q9BXS1 227 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 WWP1Q9H0M0 922 aa13.92□□□□□ -0.18
RAPGEF1-201ENST00000372189 E2F6O75461 281 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 CTDNEP1O95476 244 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 HLA-DRAP01903 254 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 IRF1P10914 325 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 FKBP1CQ5VVH2 108 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 IL17RAQ96F46 866 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 TARS2Q9BW92 718 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 GTPBP10A4D1E9 387 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 VWA5AO00534 786 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 LRG1P02750 347 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 CHN1P15882 459 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 PGM1P36871 562 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 GNL1P36915 607 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 SLC26A2P50443 739 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 NSUN2Q08J23 767 aaKnown RBP eCLIP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 EFTUD2Q15029 972 aaKnown RBP eCLIP13.91□□□□□ -0.182e-9■■■■■ 51.7
RAPGEF1-201ENST00000372189 SNRNP27Q8WVK2 155 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 GTSE1Q9NYZ3 720 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 UBQLN1Q9UMX0 589 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 MUTP22033 750 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 NUP62P37198 522 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 ACADSBP45954 432 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 Q4G0T1 1027 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 RNPC3Q96LT9 517 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 SMG5Q9UPR3 1016 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 CHMP2BQ9UQN3 213 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 USP15Q9Y4E8 981 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 AK9Q5TCS8 1911 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 F5H423 210 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 H7C4K7 107 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 HMGB3O15347 200 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 FGFR4P22455 802 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 TMEM169Q96HH4 297 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 HPDLQ96IR7 371 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 NR1H4Q96RI1 486 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 ASCC2Q9H1I8 757 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 HACD3Q9P035 362 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 PRG3Q9Y2Y8 225 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 RNF103-CHMP3A0A140T963 221 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 EIF4E1BA6NMX2 242 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 RSPH10B2B2RC85 870 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 PI4K2BG5E9Z4 385 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms