RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ZNF711Q9Y462 761 aa23.11■■□□□ 1.29
TM9SF3-201ENST00000371142 A0A1W2PQJ5 194 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 SERPINB10P48595 397 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 C11orf96Q7Z7L8 435 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 PLD3Q8IV08 490 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 AGGF1Q8N302 714 aaeCLIP23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 C1orf131Q8NDD1 294 aaKnown RBP23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 WDR48Q8TAF3 677 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 CALML6Q8TD86 181 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 TRPM1Q7Z4N2 1603 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 PCYOX1LQ8NBM8 494 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 KCNK16Q96T55 309 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 TUBE1Q9UJT0 475 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 PCSK1P29120 753 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 TRPC1P48995 793 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 USP38Q8NB14 1042 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 ZNF669Q96BR6 464 aaPredicted RBP23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 THAP11Q96EK4 314 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 PRMT7Q9NVM4 692 aaPredicted RBP23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 RHOBTB1O94844 696 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 RBP3P10745 1247 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 ORC1Q13415 861 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 FAM151AQ8WW52 585 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 BHMTQ93088 406 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 KLRC1P26715 233 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 RPA1P27694 616 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 EFHC1Q5JVL4 640 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 ZNF513Q8N8E2 541 aaPredicted RBP23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 KLK14Q9P0G3 267 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 HACL1Q9UJ83 578 aa23.1■■□□□ 1.29
TM9SF3-201ENST00000371142 WDR47O94967 919 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 RALBP11234 206 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 CDH2P19022 906 aaPredicted RBP23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 C11orf74Q86VG3 221 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 MANSC1Q9H8J5 431 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 ZFYVE28Q9HCC9 887 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 KLHL2O95198 593 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 HARS2P49590 506 aaKnown RBP23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 RGS4P49798 205 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 DGKDQ16760 1214 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 WNK4Q96J92 1243 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 L3MBTL3Q96JM7 780 aaPredicted RBP23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 TMEM106CQ9BVX2 250 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 B2RBV5 119 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 TCF7P36402 384 aaPredicted RBP23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 FXR2P51116 673 aaKnown RBP eCLIP23.09■■□□□ 1.291e-7■□□□□ 10
TM9SF3-201ENST00000371142 CENPCQ03188 943 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 GRIN1Q05586 938 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 DEPDC1Q5TB30 811 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 HORMAD1Q86X24 394 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 C2CD2LO14523 706 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 AVPR1AP37288 418 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 COILP38432 576 aaPredicted RBP23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 PTGER2P43116 358 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 CPA2P48052 419 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 FAXCQ5TGI0 409 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 BARGINQ6ZT62 677 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 PHF21AQ96BD5 680 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 RIT2Q99578 217 aa23.09■■□□□ 1.29
TM9SF3-201ENST00000371142 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 ATG4CQ96DT6 458 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 MTO1Q9Y2Z2 717 aaKnown RBP23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 KDM1AO60341 852 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 HBP1O60381 514 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 LRRC8BQ6P9F7 803 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 TRPM8Q7Z2W7 1104 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 PPIL6Q8IXY8 311 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 ERP44Q9BS26 406 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 BRD8Q9H0E9 1235 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 MYOZ2Q9NPC6 264 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 ABI2Q9NYB9 513 aaPredicted RBP23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 ZBTB39O15060 712 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 CLASP2O75122 1294 aaKnown RBP23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 CAND2O75155 1236 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 DAB1O75553 588 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 NOTUMQ6P988 496 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 PSD3Q9NYI0 1048 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 GRID1Q9ULK0 1009 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 QRICH2Q9H0J4 1663 aa23.08■■□□□ 1.29
TM9SF3-201ENST00000371142 LOC100653049A0A140TA62 436 aa23.08■■□□□ 1.28
TM9SF3-201ENST00000371142 KRT34O76011 436 aa23.08■■□□□ 1.28
TM9SF3-201ENST00000371142 KCNK10P57789 538 aa23.08■■□□□ 1.28
TM9SF3-201ENST00000371142 TRIM60Q495X7 471 aa23.08■■□□□ 1.28
TM9SF3-201ENST00000371142 SHCBP1LQ9BZQ2 653 aa23.08■■□□□ 1.28
TM9SF3-201ENST00000371142 THAP2Q9H0W7 228 aa23.08■■□□□ 1.28
TM9SF3-201ENST00000371142 PCDHB7Q9Y5E2 793 aa23.08■■□□□ 1.28
TM9SF3-201ENST00000371142 FAM200BP0CF97 657 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 FDPSP14324 419 aaKnown RBP23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 PRUNE1Q86TP1 453 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 TFB1MQ8WVM0 346 aaKnown RBP23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 E2F7Q96AV8 911 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 CMTM5Q96DZ9 223 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 SGF29Q96ES7 293 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 PAWRQ96IZ0 340 aaKnown RBP23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 TBX20Q9UMR3 447 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 SPAG6O75602 509 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 CSF1RP07333 972 aa23.07■■□□□ 1.28
TM9SF3-201ENST00000371142 MZF1P28698 734 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms