RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 H0YCG3 227 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 I3L4J1 428 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 CCL16O15467 120 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 FAM189A1O60320 539 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 PIGRP01833 764 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 CFHP08603 1231 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 ROR1Q01973 937 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 STRN3Q13033 797 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 TTC31Q49AM3 519 aaPredicted RBP16.05■□□□□ 0.16
LMO4-201ENST00000370542 VARS2Q5ST30 1063 aaKnown RBP16.05■□□□□ 0.16
LMO4-201ENST00000370542 TCEAL8Q8IYN2 117 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 GPR152Q8TDT2 470 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 RUBCNQ92622 972 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 C18orf25Q96B23 403 aaPredicted RBP16.05■□□□□ 0.16
LMO4-201ENST00000370542 SUSD3Q96L08 255 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 TCHPQ9BT92 498 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 RPP25Q9BUL9 199 aaKnown RBP16.05■□□□□ 0.16
LMO4-201ENST00000370542 BLOC1S4Q9NUP1 217 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 GEMIN8Q9NWZ8 242 aaKnown RBP16.05■□□□□ 0.16
LMO4-201ENST00000370542 DLGAP2Q9P1A6 1054 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.05■□□□□ 0.16
LMO4-201ENST00000370542 OTOGLQ3ZCN5 2332 aa16.05■□□□□ 0.16
LMO4-201ENST00000370542 WDR27A2RRH5 827 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 A6NNZ2 444 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 AKR1B15C9JRZ8 316 aaPredicted RBP16.04■□□□□ 0.16
LMO4-201ENST00000370542 CLDN3O15551 220 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 BMP15O95972 392 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 ATF2P15336 505 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 ERCC5P28715 1186 aaPredicted RBP16.04■□□□□ 0.16
LMO4-201ENST00000370542 LRPAP1P30533 357 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 NOP2P46087 812 aaKnown RBP16.04■□□□□ 0.16
LMO4-201ENST00000370542 AARSP49588 968 aaKnown RBP eCLIP16.04■□□□□ 0.16
LMO4-201ENST00000370542 STARD6P59095 220 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 TUBB8Q3ZCM7 444 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 ICE2Q659A1 982 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 PARM1Q6UWI2 310 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 MTSS1LQ765P7 747 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 ITFG1Q8TB96 612 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 FIZ1Q96SL8 496 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 HSD3B7Q9H2F3 369 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 MAFFQ9ULX9 164 aa16.04■□□□□ 0.16
LMO4-201ENST00000370542 NPHP3-ACAD11A0A0J9YXS1 232 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 VGLL3A8MV65 326 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 M0QZQ0 153 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 MICAL2O94851 1124 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 CPP00450 1065 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 CLTAP09496 248 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 CYP3A5P20815 502 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 LONP1P36776 959 aaKnown RBP16.03■□□□□ 0.16
LMO4-201ENST00000370542 PABPC1LQ4VXU2 614 aaKnown RBP16.03■□□□□ 0.16
LMO4-201ENST00000370542 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
LMO4-201ENST00000370542 TPGS2Q68CL5 300 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 POTEHQ6S545 545 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 HAUS6Q7Z4H7 955 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 NPAS3Q8IXF0 933 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 EFCAB13Q8IY85 973 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 DCLK2Q8N568 766 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 BEST2Q8NFU1 509 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 TSPAN18Q96SJ8 248 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 PLIN2Q99541 437 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 REEP2Q9BRK0 252 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 DDX23Q9BUQ8 820 aaKnown RBP16.03■□□□□ 0.16
LMO4-201ENST00000370542 ARHGEF3Q9NR81 526 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 HCFC1R1Q9NWW0 138 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 FBXL5Q9UKA1 691 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 R4GN57 208 aa16.03■□□□□ 0.16
LMO4-201ENST00000370542 CTAGE9A4FU28 777 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 H7C4K7 107 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 BIN1O00499 593 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 SDHBP21912 280 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 UBA7P41226 1012 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 ATXN1P54253 815 aaKnown RBP16.02■□□□□ 0.16
LMO4-201ENST00000370542 GPC5P78333 572 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 GRIN1Q05586 938 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 KYAT1Q16773 422 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 FILIP1LQ4L180 1135 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 SEZ6Q53EL9 994 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 C10orf67Q8IYJ2 551 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 DDX12PQ92771 950 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 TBC1D17Q9HA65 648 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 GDE1Q9NZC3 331 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 PCDHB8Q9UN66 801 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 L1RE1Q9UN81 338 aa16.02■□□□□ 0.16
LMO4-201ENST00000370542 ANKRD11Q6UB99 2663 aaPredicted RBP16.02■□□□□ 0.15
LMO4-201ENST00000370542 SPTBN2O15020 2390 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 OAZ2O95190 189 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 SEC24AO95486 1093 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 RHOP08100 348 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 CXCL8P10145 99 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 ATP1A3P13637 1013 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 ZNF18P17022 549 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 PTPN2P17706 415 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 USP8P40818 1118 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 GTF2A1P52655 376 aaPredicted RBP16.01■□□□□ 0.15
LMO4-201ENST00000370542 GTF2BQ00403 316 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 TRIM14Q14142 442 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 ACAP1Q15027 740 aa16.01■□□□□ 0.15
LMO4-201ENST00000370542 SLC5A9Q2M3M2 681 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms