RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 GRIN3BO60391 1043 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 DDNO94850 711 aaPredicted RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 DMTNQ08495 405 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 OVGP1Q12889 678 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 RBM12Q9NTZ6 932 aaKnown RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 NOP53Q9NZM5 478 aaKnown RBP13.09□□□□□ -0.31
TMEM56-201ENST00000370203 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
TMEM56-201ENST00000370203 SH3BGRLO75368 114 aa13.08□□□□□ -0.31
TMEM56-201ENST00000370203 CD4P01730 458 aa13.08□□□□□ -0.31
TMEM56-201ENST00000370203 ARP10275 920 aa13.08□□□□□ -0.31
TMEM56-201ENST00000370203 FXR1P51114 621 aaKnown RBP eCLIP13.08□□□□□ -0.31
TMEM56-201ENST00000370203 SREBF2Q12772 1141 aa13.08□□□□□ -0.31
TMEM56-201ENST00000370203 ZFP42Q96MM3 310 aa13.08□□□□□ -0.31
TMEM56-201ENST00000370203 TRIM62Q9BVG3 475 aa13.08□□□□□ -0.31
TMEM56-201ENST00000370203 PCNAP12004 261 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 ITGA8P53708 1063 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 NFIAQ12857 509 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 PGS1Q32NB8 556 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 DCP1BQ8IZD4 617 aaKnown RBP13.08□□□□□ -0.32
TMEM56-201ENST00000370203 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 VPS50Q96JG6 964 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 MYCBPQ99417 103 aaPredicted RBP13.08□□□□□ -0.32
TMEM56-201ENST00000370203 STK33Q9BYT3 514 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 CYTH3O43739 400 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 HSPA9P38646 679 aaKnown RBP13.08□□□□□ -0.32
TMEM56-201ENST00000370203 NBPF12Q5TAG4 269 aaPredicted RBP13.08□□□□□ -0.32
TMEM56-201ENST00000370203 TSC22D3Q99576 134 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 NFKBIZQ9BYH8 718 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 SPATA31A1Q5TZJ5 1347 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 TRIM60Q495X7 471 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 ENOSF1Q7L5Y1 443 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 DDI1Q8WTU0 396 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 SCFD1Q8WVM8 642 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 ZNF669Q96BR6 464 aaPredicted RBP13.08□□□□□ -0.32
TMEM56-201ENST00000370203 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 ZDHHC9Q9Y397 364 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 IL10P22301 178 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 ZNF200P98182 395 aaPredicted RBP13.08□□□□□ -0.32
TMEM56-201ENST00000370203 TBC1D19Q8N5T2 526 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 CAND2O75155 1236 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 CKMP06732 381 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 FGFR1P11362 822 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 ANTXR2P58335 489 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.32
TMEM56-201ENST00000370203 PLCL1Q15111 1095 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 FAM151AQ8WW52 585 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 FBXO32Q969P5 355 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 YY1AP1Q9H869 796 aa13.08□□□□□ -0.32
TMEM56-201ENST00000370203 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 ZNF521Q96K83 1311 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 TMEM150BA6NC51 233 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 CYB561D2O14569 222 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 EXTL3O43909 919 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 PHF2O75151 1096 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 IGFBP4P22692 258 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 AP3M2P53677 418 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 TAP1Q03518 808 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 STX3Q13277 289 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 CCDC81Q6ZN84 652 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 COL23A1Q86Y22 540 aaPredicted RBP13.07□□□□□ -0.32
TMEM56-201ENST00000370203 LPAR1Q92633 364 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 FAM32AQ9Y421 112 aaKnown RBP13.07□□□□□ -0.32
TMEM56-201ENST00000370203 TPST1O60507 370 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 NTSR2O95665 410 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 PLA2G4AP47712 749 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 HIC1Q14526 733 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 DEPDC1Q5TB30 811 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 ANKRD13AQ8IZ07 590 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 OTUB1Q96FW1 271 aaPredicted RBP13.07□□□□□ -0.32
TMEM56-201ENST00000370203 OSMRQ99650 979 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 CATSPERBQ9H7T0 1116 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 SETD4Q9NVD3 440 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 PLEKHG2Q9H7P9 1386 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.07□□□□□ -0.32
TMEM56-201ENST00000370203 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
TMEM56-201ENST00000370203 ZNF177Q13360 481 aaPredicted RBP13.07□□□□□ -0.32
TMEM56-201ENST00000370203 ALX1Q15699 326 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 CHI3L2Q15782 390 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 HORMAD1Q86X24 394 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 THTPAQ9BU02 230 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 THAP2Q9H0W7 228 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 SPATS2LQ9NUQ6 558 aaKnown RBP13.07□□□□□ -0.32
TMEM56-201ENST00000370203 SMPD4Q9NXE4 827 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 WWOXQ9NZC7 414 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 ZNF229Q9UJW7 825 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 RAD51CO43502 376 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 ACAT1P24752 427 aaKnown RBP13.07□□□□□ -0.32
TMEM56-201ENST00000370203 KYNUQ16719 465 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 EDEM1Q92611 657 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 TMEM169Q96HH4 297 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 HEATR9A2RTY3 570 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 GRID2IPA4D2P6 1211 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 MSH4O15457 936 aa13.07□□□□□ -0.32
TMEM56-201ENST00000370203 ODC1P11926 461 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms