RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 LNPEPQ9UIQ6 1025 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 MAST3O60307 1309 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 PDS5AQ29RF7 1337 aaKnown RBP10.88□□□□□ -0.67
PRDM1-201ENST00000369089 SETD1BQ9UPS6 1966 aaKnown RBP10.88□□□□□ -0.67
PRDM1-201ENST00000369089 CASP1P29466 404 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 RPS6P62753 249 aaKnown RBP10.88□□□□□ -0.67
PRDM1-201ENST00000369089 KLHL12Q53G59 568 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 JADE1Q6IE81 842 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 TTI2Q6NXR4 508 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 ZNF589Q86UQ0 364 aaPredicted RBP10.88□□□□□ -0.67
PRDM1-201ENST00000369089 ENDOVQ8N8Q3 282 aaKnown RBP10.88□□□□□ -0.67
PRDM1-201ENST00000369089 APPL2Q8NEU8 664 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 ERLEC1Q96DZ1 483 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 BTBD9Q96Q07 612 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 PLEKHA5Q9HAU0 1116 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 SOX13Q9UN79 622 aa10.88□□□□□ -0.67
PRDM1-201ENST00000369089 F8W810 466 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 GNGT2O14610 69 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 ZBED4O75132 1171 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 ITIH1P19827 911 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 CCNA2P20248 432 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 SLC16A2P36021 539 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 CLK1P49759 484 aaKnown RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 BFSP1Q12934 665 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 DEPDC1Q5TB30 811 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 C14orf80Q86SX3 495 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 AIFM2Q9BRQ8 373 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 TMEM120AQ9BXJ8 343 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 ZNF717Q9BY31 904 aaPredicted RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 STK24Q9Y6E0 443 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 USP31Q70CQ4 1352 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 MAGEB16A2A368 324 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 SMCO2A6NFE2 343 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 ALADP13716 330 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 NAMPTP43490 491 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 THOP1P52888 689 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 SLC18A3Q16572 532 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 DGUOKQ16854 277 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 ZNF829Q3KNS6 432 aaPredicted RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 KBTBD2Q8IY47 623 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 HELQQ8TDG4 1101 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 PHF12Q96QT6 1004 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 UNKQ9C0B0 810 aaKnown RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 GREM2Q9H772 168 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 GPAMQ9HCL2 828 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 TUFT1Q9NNX1 390 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 ZNF277Q9NRM2 450 aaPredicted RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 C20orf96Q9NUD7 363 aaPredicted RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 V9GY48 417 aaPredicted RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 FCHO1O14526 889 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 AKAP10O43572 662 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 BMP10O95393 424 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 RPA1P27694 616 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 GPSM2P81274 684 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 FKBP3Q00688 224 aaKnown RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 RPS6KA2Q15349 733 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 COBLL1Q53SF7 1204 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 RUNDC3AQ59EK9 446 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 ZFP1Q6P2D0 407 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 ZNF398Q8TD17 642 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 IRGQQ8WZA9 623 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 FARSBQ9NSD9 589 aaKnown RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 PCDHB6Q9Y5E3 794 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 PRR23AA6NEV1 266 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 TNFRSF10AO00220 468 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 NBNO60934 754 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 MYL2P10916 166 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 IL6STP40189 918 aaPredicted RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 CCT8P50990 548 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 FAM83BQ5T0W9 1011 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 CYFIP1Q7L576 1253 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 POC5Q8NA72 575 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 C2orf49Q9BVC5 232 aaPredicted RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 EMILIN2Q9BXX0 1053 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 GMIPQ9P107 970 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 SLC8A2Q9UPR5 921 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 COPG1Q9Y678 874 aaKnown RBP10.87□□□□□ -0.67
PRDM1-201ENST00000369089 AP4B1Q9Y6B7 739 aa10.87□□□□□ -0.67
PRDM1-201ENST00000369089 HEG1Q9ULI3 1381 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 CAMSAP1Q5T5Y3 1602 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 PTPRMP28827 1452 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.86□□□□□ -0.67
PRDM1-201ENST00000369089 GSC2O15499 205 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 PSTPIP1O43586 416 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 USP12O75317 370 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 MMP1P03956 469 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 HSPD1P10809 573 aaKnown RBP10.86□□□□□ -0.67
PRDM1-201ENST00000369089 GPD2P43304 727 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 TUBP50607 506 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 NADK2Q4G0N4 442 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 ARL6IP4Q66PJ3 421 aaKnown RBP10.86□□□□□ -0.67
PRDM1-201ENST00000369089 CYB5R4Q7L1T6 521 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 STK32CQ86UX6 486 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 MICU2Q8IYU8 434 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 KRT35Q92764 455 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 PLEKHA8Q96JA3 519 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 EYA3Q99504 573 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 GCOM2Q9BZD3 368 aaPredicted RBP10.86□□□□□ -0.67
PRDM1-201ENST00000369089 USTQ9Y2C2 406 aa10.86□□□□□ -0.67
PRDM1-201ENST00000369089 HEY1Q9Y5J3 304 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms