RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 HEXIM2Q96MH2 286 aaKnown RBP25.38■■□□□ 1.65
SNX3-203ENST00000368979 TBC1D13Q9NVG8 400 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.38■■□□□ 1.65
SNX3-203ENST00000368979 GRID2IPA4D2P6 1211 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 A8MXQ7 604 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 KIAA0355O15063 1070 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 B4GALT3O60512 393 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 NOP2P46087 812 aaKnown RBP25.37■■□□□ 1.65
SNX3-203ENST00000368979 HADHBP55084 474 aaKnown RBP25.37■■□□□ 1.65
SNX3-203ENST00000368979 CNGA2Q16280 664 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 UBE2Q1Q7Z7E8 422 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 OSTM1Q86WC4 334 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 C1orf131Q8NDD1 294 aaKnown RBP25.37■■□□□ 1.65
SNX3-203ENST00000368979 TPCN2Q8NHX9 752 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 RABGGTAQ92696 567 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 TRIM11Q96F44 468 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 OSGEPQ9NPF4 335 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 STXBP5LQ9Y2K9 1186 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 TSC2P49815 1807 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 MICAL3Q7RTP6 2002 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 LTBP2Q14767 1821 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 PALMO75781 387 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 DDHD2O94830 711 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 TIMP1P01033 207 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 MYBL1P10243 752 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 GNL1P36915 607 aaPredicted RBP25.37■■□□□ 1.65
SNX3-203ENST00000368979 DENND1BQ6P3S1 775 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 ACOT1Q86TX2 421 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 ZNF280BQ86YH2 543 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 CRYBG2Q8N1P7 616 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 WDTC1Q8N5D0 677 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 VCPIP1Q96JH7 1222 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 CASD1Q96PB1 797 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 SNX25Q9H3E2 840 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 LRFN2Q9ULH4 789 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 COG5Q9UP83 839 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 CEP83Q9Y592 693 aa25.37■■□□□ 1.65
SNX3-203ENST00000368979 TRIM43BA6NCK2 446 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 GABRDO14764 452 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 HCRTO43612 131 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 MTA2O94776 668 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 MICAL2O94851 1124 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 ITGB8P26012 769 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 C1QBPQ07021 282 aaKnown RBP25.36■■□□□ 1.65
SNX3-203ENST00000368979 PTP4A2Q12974 167 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 STILQ15468 1287 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 TIGD5Q53EQ6 642 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 WSCD1Q658N2 575 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 NPAS4Q8IUM7 802 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 COLGALT2Q8IYK4 626 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 TMEM86AQ8N2M4 240 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 LRRC57Q8N9N7 239 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 TRIM43Q96BQ3 446 aaPredicted RBP25.36■■□□□ 1.65
SNX3-203ENST00000368979 CALR3Q96L12 384 aaKnown RBP25.36■■□□□ 1.65
SNX3-203ENST00000368979 DPEP3Q9H4B8 488 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 AVENQ9NQS1 362 aaPredicted RBP25.36■■□□□ 1.65
SNX3-203ENST00000368979 JRKLQ9Y4A0 524 aa25.36■■□□□ 1.65
SNX3-203ENST00000368979 TTC3P53804 2025 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 ATMINO43313 823 aaPredicted RBP25.35■■□□□ 1.65
SNX3-203ENST00000368979 HOXA2O43364 376 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 B3GAT3O94766 335 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 ATP1A1P05023 1023 aaKnown RBP25.35■■□□□ 1.65
SNX3-203ENST00000368979 MMP8P22894 467 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 LMO2P25791 158 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 DCLRE1AQ6PJP8 1040 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 LCLAT1Q6UWP7 414 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 DSTYKQ6XUX3 929 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 ABI1Q8IZP0 508 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 C11orf70Q9BRQ4 267 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 L2HGDHQ9H9P8 463 aa25.35■■□□□ 1.65
SNX3-203ENST00000368979 RNF216Q9NWF9 866 aaPredicted RBP25.35■■□□□ 1.65
SNX3-203ENST00000368979 CNOT8Q9UFF9 292 aaKnown RBP25.35■■□□□ 1.65
SNX3-203ENST00000368979 ENC1O14682 589 aa25.34■■□□□ 1.65
SNX3-203ENST00000368979 URI1O94763 535 aaPredicted RBP25.34■■□□□ 1.65
SNX3-203ENST00000368979 ARHGAP17Q68EM7 881 aa25.34■■□□□ 1.65
SNX3-203ENST00000368979 C12orf29Q8N999 325 aa25.34■■□□□ 1.65
SNX3-203ENST00000368979 RSPH1Q8WYR4 309 aa25.34■■□□□ 1.65
SNX3-203ENST00000368979 PRDM5Q9NQX1 630 aaPredicted RBP25.34■■□□□ 1.65
SNX3-203ENST00000368979 ADAM22Q9P0K1 906 aa25.34■■□□□ 1.65
SNX3-203ENST00000368979 CTTNBP2NLQ9P2B4 639 aa25.34■■□□□ 1.65
SNX3-203ENST00000368979 UVRAGQ9P2Y5 699 aa25.34■■□□□ 1.65
SNX3-203ENST00000368979 TSPAN16Q9UKR8 245 aa25.34■■□□□ 1.65
SNX3-203ENST00000368979 TMEM189-UBE2V1I3L0A0 370 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 M0QYV0 167 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 KIF4AO95239 1232 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 GATMP50440 423 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 AMPD2Q01433 879 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 IKBKEQ14164 716 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 PPP1R26Q5T8A7 1209 aaPredicted RBP25.33■■□□□ 1.65
SNX3-203ENST00000368979 PAPD7Q5XG87 772 aaKnown RBP25.33■■□□□ 1.65
SNX3-203ENST00000368979 MMS22LQ6ZRQ5 1243 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 SLFN11Q7Z7L1 901 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 SPATA18Q8TC71 538 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 DNAI2Q9GZS0 605 aa25.33■■□□□ 1.65
SNX3-203ENST00000368979 M0QZQ0 153 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 PDGFRBP09619 1106 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 ODC1P11926 461 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 EN2P19622 333 aaPredicted RBP25.32■■□□□ 1.64
SNX3-203ENST00000368979 RRM1P23921 792 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 BRCC3P46736 316 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms