RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 M0QZQ0 153 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 TEX33O43247 280 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 LRRN2O75325 713 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 KCNQ1P51787 676 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 MFAP3P55082 362 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 CUL2Q13617 745 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 RAPGEF1Q13905 1077 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 ZNF280DQ6N043 979 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 ANKRD54Q6NXT1 300 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 RRAGAQ7L523 313 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 THEM5Q8N1Q8 247 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 TMEM86AQ8N2M4 240 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 SMRP1Q8NCR6 262 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 OR6B3Q8NGW1 331 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 TATDN2Q93075 761 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 FAM81BQ96LP2 452 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 APOBEC3GQ9HC16 384 aaKnown RBP13.53□□□□□ -0.24
EFNA1-201ENST00000368406 UBE2TQ9NPD8 197 aaPredicted RBP13.53□□□□□ -0.24
EFNA1-201ENST00000368406 DZANK1Q9NVP4 752 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 BARX2Q9UMQ3 279 aaPredicted RBP13.53□□□□□ -0.24
EFNA1-201ENST00000368406 L1RE1Q9UN81 338 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 BACE2Q9Y5Z0 518 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 VWA8A3KMH1 1905 aa13.52□□□□□ -0.24
EFNA1-201ENST00000368406 WEE2P0C1S8 567 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 TYMPP19971 482 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 RFX1P22670 979 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 ASPAP45381 313 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 KLK7P49862 253 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 RBM10P98175 930 aaKnown RBP13.52□□□□□ -0.25
EFNA1-201ENST00000368406 APBA1Q02410 837 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 SMAD4Q13485 552 aaKnown RBP13.52□□□□□ -0.25
EFNA1-201ENST00000368406 PSMD5Q16401 504 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 ARHGAP44Q17R89 818 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 SOWAHAQ2M3V2 549 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 CTXN3Q4LDR2 81 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
EFNA1-201ENST00000368406 PTCRAQ6ISU1 281 aaPredicted RBP13.52□□□□□ -0.25
EFNA1-201ENST00000368406 LLGL2Q6P1M3 1020 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 SARM1Q6SZW1 724 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 DPH6Q7L8W6 267 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 CACNA2D4Q7Z3S7 1137 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 ARHGEF19Q8IW93 802 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 HDAC7Q8WUI4 952 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 ERGIC2Q96RQ1 377 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 CYP3A43Q9HB55 503 aa13.52□□□□□ -0.25
EFNA1-201ENST00000368406 A0A1W2PQC6 194 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 GLUD1P00367 558 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 TPM1P09493 284 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 KRT5P13647 590 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 CPB1P15086 417 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 EPCAMP16422 314 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 USP8P40818 1118 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 LHX1P48742 406 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 CDH8P55286 799 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 ARPP19P56211 112 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 TSPY1Q01534 308 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 ITIH3Q06033 890 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 KCNMA1Q12791 1236 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 MRPL58Q14197 206 aaKnown RBP13.51□□□□□ -0.25
EFNA1-201ENST00000368406 NR1I3Q14994 352 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 SYCE2Q6PIF2 218 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 ELMSAN1Q6PJG2 1045 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 PRSS55Q6UWB4 352 aaPredicted RBP13.51□□□□□ -0.25
EFNA1-201ENST00000368406 ENOSF1Q7L5Y1 443 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 TTC39CQ8N584 583 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 SPAG5Q96R06 1193 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 ARID3AQ99856 593 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 MRPL45Q9BRJ2 306 aaKnown RBP13.51□□□□□ -0.25
EFNA1-201ENST00000368406 BCO2Q9BYV7 579 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 S1PR5Q9H228 398 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 PLEKHA4Q9H4M7 779 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 GRPEL1Q9HAV7 217 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 DDX43Q9NXZ2 648 aaKnown RBP13.51□□□□□ -0.25
EFNA1-201ENST00000368406 MTRRQ9UBK8 725 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 DNAJC12Q9UKB3 198 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 PCDHB4Q9Y5E5 795 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 NCOR1O75376 2440 aa13.51□□□□□ -0.25
EFNA1-201ENST00000368406 A8MXQ7 604 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 MBTPS2O43462 519 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 TBC1D4O60343 1298 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 TACC1O75410 805 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 OAZ2O95190 189 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 PAPLNO95428 1278 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 CYP11A1P05108 521 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 WARSP23381 471 aaKnown RBP13.5□□□□□ -0.25
EFNA1-201ENST00000368406 PCSK1P29120 753 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 GNL1P36915 607 aaPredicted RBP13.5□□□□□ -0.25
EFNA1-201ENST00000368406 POLR2FP61218 127 aaKnown RBP13.5□□□□□ -0.25
EFNA1-201ENST00000368406 GCNT1Q02742 428 aa13.5□□□□□ -0.25
EFNA1-201ENST00000368406 RAB33AQ14088 237 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms