RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 NTHL1P78549 312 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 MYL7Q01449 175 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 TRPC3Q13507 836 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 PTPN21Q16825 1174 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 SOWAHAQ2M3V2 549 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 EDRF1Q3B7T1 1238 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 PABPC1LQ4VXU2 614 aaKnown RBP10.58□□□□□ -0.72
CD48-202ENST00000368046 SLC39A12Q504Y0 691 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 TMEM31Q5JXX7 168 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 CEP135Q66GS9 1140 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 IQCEQ6IPM2 695 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 LIMS2Q7Z4I7 341 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 LRRTM3Q86VH5 581 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 SMYD4Q8IYR2 804 aaPredicted RBP10.58□□□□□ -0.72
CD48-202ENST00000368046 ELMOD1Q8N336 334 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 PDCL2Q8N4E4 241 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 ATAD1Q8NBU5 361 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 OR10T2Q8NGX3 314 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 PLEKHO2Q8TD55 490 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 C2orf15Q8WU43 125 aaKnown RBP10.58□□□□□ -0.72
CD48-202ENST00000368046 ERCC4Q92889 916 aaPredicted RBP10.58□□□□□ -0.72
CD48-202ENST00000368046 NXPE3Q969Y0 559 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 PGLYRP2Q96PD5 576 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 MYADMQ96S97 322 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 KCNK12Q9HB15 430 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 HCFC1R1Q9NWW0 138 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 DDX43Q9NXZ2 648 aaKnown RBP10.58□□□□□ -0.72
CD48-202ENST00000368046 IGSF9Q9P2J2 1179 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 EPS15L1Q9UBC2 864 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 SORCS3Q9UPU3 1222 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 SLC27A5Q9Y2P5 690 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 ASB3Q9Y575 518 aa10.58□□□□□ -0.72
CD48-202ENST00000368046 PRR33A8MZF0 331 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 CETN3O15182 167 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 TACC1O75410 805 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 AKAP3O75969 853 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 MICAL2O94851 1124 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 VNN2O95498 520 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 RHOP08100 348 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 PPP1R2P41236 205 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 VAMP7P51809 220 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 EPHB3P54753 998 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 DLG4P78352 724 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 TSPY1Q01534 308 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 ENPEPQ07075 957 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 TWF1Q12792 350 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 PLD1Q13393 1074 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 NFE2Q16621 373 aaPredicted RBP10.57□□□□□ -0.72
CD48-202ENST00000368046 WDR72Q3MJ13 1102 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 ZCWPW2Q504Y3 356 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 CYP4A22Q5TCH4 519 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 ISM2Q6H9L7 571 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 CLEC17AQ6ZS10 378 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 TRIM67Q6ZTA4 783 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 INTS8Q75QN2 995 aaKnown RBP10.57□□□□□ -0.72
CD48-202ENST00000368046 UBALD2Q8IYN6 164 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 ADSSL1Q8N142 457 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 LEMD2Q8NC56 503 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 ITFG1Q8TB96 612 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 SPPL2BQ8TCT7 592 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 SYAP1Q96A49 352 aaPredicted RBP10.57□□□□□ -0.72
CD48-202ENST00000368046 MMS19Q96T76 1030 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 CORO1BQ9BR76 489 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 LRFN3Q9BTN0 628 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 CRISPLD1Q9H336 500 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 CEP72Q9P209 647 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 CDH7Q9ULB5 785 aa10.57□□□□□ -0.72
CD48-202ENST00000368046 MRPS23Q9Y3D9 190 aaKnown RBP10.57□□□□□ -0.72
CD48-202ENST00000368046 TCHHQ07283 1943 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 ASGR2P07307 311 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 KRT13P13646 458 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 PCSK1P29120 753 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 GNL1P36915 607 aaPredicted RBP10.56□□□□□ -0.72
CD48-202ENST00000368046 MYL6P60660 151 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 FKBP3Q00688 224 aaKnown RBP10.56□□□□□ -0.72
CD48-202ENST00000368046 BIRC3Q13489 604 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 TDGQ13569 410 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 STIM1Q13586 685 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 MTMR3Q13615 1198 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 SGSM1Q2NKQ1 1148 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 ANKRD40Q6AI12 368 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 SV2AQ7L0J3 742 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 GET4Q7L5D6 327 aaPredicted RBP10.56□□□□□ -0.72
CD48-202ENST00000368046 BMP8AQ7Z5Y6 402 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 OSTM1Q86WC4 334 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 FAM186BQ8IYM0 893 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 ADGRF2Q8IZF7 708 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 SLC44A3Q8N4M1 653 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 FGF13Q92913 245 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 DHTKD1Q96HY7 919 aaPredicted RBP10.56□□□□□ -0.72
CD48-202ENST00000368046 TSG101Q99816 390 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 MKNK1Q9BUB5 465 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 XYLT2Q9H1B5 865 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 VRTNQ9H8Y1 702 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 C11orf16Q9NQ32 467 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
CD48-202ENST00000368046 GDE1Q9NZC3 331 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 MAN1B1Q9UKM7 699 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 GTF3C4Q9UKN8 822 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 YIPF1Q9Y548 306 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms