RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 LRRC52Q8N7C0 313 aa15.75■□□□□ 0.11
SF3B5-201ENST00000367569 NXPE3Q969Y0 559 aa15.75■□□□□ 0.11
SF3B5-201ENST00000367569 GSDMAQ96QA5 445 aa15.75■□□□□ 0.11
SF3B5-201ENST00000367569 CA14Q9ULX7 337 aa15.75■□□□□ 0.11
SF3B5-201ENST00000367569 SLC27A5Q9Y2P5 690 aa15.75■□□□□ 0.11
SF3B5-201ENST00000367569 R3HCC1Q9Y3T6 440 aaKnown RBP15.75■□□□□ 0.11
SF3B5-201ENST00000367569 YIPF1Q9Y548 306 aa15.75■□□□□ 0.11
SF3B5-201ENST00000367569 VPS13AQ96RL7 3174 aa15.75■□□□□ 0.11
SF3B5-201ENST00000367569 PTPRDP23468 1912 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 OBSL1O75147 1896 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 MTMR11A4FU01 709 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 ANHXE9PGG2 379 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 NRG2O14511 850 aaPredicted RBP15.74■□□□□ 0.11
SF3B5-201ENST00000367569 PHACTR2O75167 634 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 ABLIM3O94929 683 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 CST3P01034 146 aaPredicted RBP15.74■□□□□ 0.11
SF3B5-201ENST00000367569 LRG1P02750 347 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 HNRNPA1P09651 372 aaKnown RBP eCLIP15.74■□□□□ 0.11
SF3B5-201ENST00000367569 SRFP11831 508 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 FSHRP23945 695 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 PNPLA4P41247 253 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 RAP1GAPP47736 663 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 PSMC1P62191 440 aaKnown RBP15.74■□□□□ 0.11
SF3B5-201ENST00000367569 C1orf220Q5T0J3 134 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 ASCL5Q7RTU5 278 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 SLC9A9Q8IVB4 645 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 ATAD1Q8NBU5 361 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 ZNF461Q8TAF7 563 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 SPATA20Q8TB22 786 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 GPR152Q8TDT2 470 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 PARD3BQ8TEW8 1205 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 RPP25Q9BUL9 199 aaKnown RBP15.74■□□□□ 0.11
SF3B5-201ENST00000367569 TMLHEQ9NVH6 421 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 FRMD4BQ9Y2L6 1034 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 NUMBLQ9Y6R0 609 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 SPTBN4Q9H254 2564 aa15.74■□□□□ 0.11
SF3B5-201ENST00000367569 OR6C75A6NL08 312 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 HUS1O60921 280 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 VNN1O95497 513 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 CYP11A1P05108 521 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 ATF2P15336 505 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 STX17P56962 302 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 TWF1Q12792 350 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 DUSP4Q13115 394 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 ADAM9Q13443 819 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 TRPC3Q13507 836 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 SLC5A9Q2M3M2 681 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 ANKRD40Q6AI12 368 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 FRMD5Q7Z6J6 570 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 ADSSL1Q8N142 457 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 DTWD2Q8NBA8 298 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 ITFG1Q8TB96 612 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 FGF14Q92915 247 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 MMS19Q96T76 1030 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 SEPT5Q99719 369 aaPredicted RBP15.73■□□□□ 0.11
SF3B5-201ENST00000367569 LPIN3Q9BQK8 851 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 MRPL45Q9BRJ2 306 aaKnown RBP15.73■□□□□ 0.11
SF3B5-201ENST00000367569 SMYD3Q9H7B4 428 aa15.73■□□□□ 0.11
SF3B5-201ENST00000367569 DDX43Q9NXZ2 648 aaKnown RBP15.73■□□□□ 0.11
SF3B5-201ENST00000367569 ABI2Q9NYB9 513 aaPredicted RBP15.73■□□□□ 0.11
SF3B5-201ENST00000367569 NXF1Q9UBU9 619 aaKnown RBP15.73■□□□□ 0.11
SF3B5-201ENST00000367569 AFF4Q9UHB7 1163 aaKnown RBP15.73■□□□□ 0.11
SF3B5-201ENST00000367569 PRR23AA6NEV1 266 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 STK25O00506 426 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 HOXA9P31269 272 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 PIK3CAP42336 1068 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 GCLMP48507 274 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 GPR15P49685 360 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 VAMP7P51809 220 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 MYO1EQ12965 1108 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 MORC3Q14149 939 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 SOWAHAQ2M3V2 549 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 ZNF699Q32M78 642 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 DCAF17Q5H9S7 520 aaPredicted RBP15.72■□□□□ 0.11
SF3B5-201ENST00000367569 SPOPLQ6IQ16 392 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 PARM1Q6UWI2 310 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 LRRTM3Q86VH5 581 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 HS6ST3Q8IZP7 471 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 KBTBD7Q8WVZ9 684 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 FGF13Q92913 245 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 TSG101Q99816 390 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 CORO1BQ9BR76 489 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 PI4K2AQ9BTU6 479 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 ZCWPW1Q9H0M4 648 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 TBC1D17Q9HA65 648 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 DNMT3BQ9UBC3 853 aaKnown RBP15.72■□□□□ 0.11
SF3B5-201ENST00000367569 DSEQ9UL01 958 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 CDH7Q9ULB5 785 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 NME7Q9Y5B8 376 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 ZFP37Q9Y6Q3 630 aaPredicted RBP15.72■□□□□ 0.11
SF3B5-201ENST00000367569 COL4A3Q01955 1670 aa15.72■□□□□ 0.11
SF3B5-201ENST00000367569 ARHGEF37A1IGU5 675 aa15.71■□□□□ 0.11
SF3B5-201ENST00000367569 ATP2C2O75185 946 aa15.71■□□□□ 0.11
SF3B5-201ENST00000367569 XYLBO75191 536 aa15.71■□□□□ 0.11
SF3B5-201ENST00000367569 LRRN2O75325 713 aa15.71■□□□□ 0.11
SF3B5-201ENST00000367569 KRT13P13646 458 aa15.71■□□□□ 0.11
SF3B5-201ENST00000367569 GJA1P17302 382 aa15.71■□□□□ 0.11
SF3B5-201ENST00000367569 TNNC1P63316 161 aa15.71■□□□□ 0.11
SF3B5-201ENST00000367569 PPP3CAQ08209 521 aa15.71■□□□□ 0.11
SF3B5-201ENST00000367569 ORC1Q13415 861 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms