RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 RFX8Q6ZV50 586 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 SPATA21Q7Z572 469 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 MXRA8Q9BRK3 442 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 NIF3L1Q9GZT8 377 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 CAMK2GQ13555 558 aaPredicted RBP16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.37■□□□□ 0.217e-7■■■■■ 50.8
NUCKS1-201ENST00000367142 ZCWPW1Q9H0M4 648 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 PITPNM2Q9BZ72 1349 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 HLA-DRAP01903 254 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 CYTH1Q15438 398 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 LRRC71Q8N4P6 559 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 JADE3Q92613 823 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 VPS50Q96JG6 964 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 RBM15Q96T37 977 aaKnown RBP eCLIP16.37■□□□□ 0.211e-15■■□□□ 13.8
NUCKS1-201ENST00000367142 SCN3BQ9NY72 215 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 NEU2Q9Y3R4 380 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 CYP2C8P10632 490 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 CNGA3Q16281 694 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 MDH1BQ5I0G3 518 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 FBXO38Q6PIJ6 1188 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 ZNF677Q86XU0 584 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 HPDLQ96IR7 371 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 KCNK16Q96T55 309 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 TMEM8AQ9HCN3 771 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 ADCY3O60266 1144 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 SYNCRIPO60506 623 aaKnown RBP16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 URODP06132 367 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 GEMP55040 296 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 STYK1Q6J9G0 422 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 UBA3Q8TBC4 463 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 DPF3Q92784 378 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 EIF3LQ9Y262 564 aaKnown RBP16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 PTK7Q13308 1070 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 PLA2G4FQ68DD2 849 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 CYGBQ8WWM9 190 aa16.37■□□□□ 0.21
NUCKS1-201ENST00000367142 POTEAQ6S8J7 498 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 USE1Q9NZ43 259 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 DDX42Q86XP3 938 aaKnown RBP eCLIP16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 CHST12Q9NRB3 414 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 METTL5Q9NRN9 209 aaKnown RBP16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 AMACRQ9UHK6 382 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 GAS2O43903 313 aaKnown RBP16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 KLHL2O95198 593 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 PTGER2P43116 358 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 PRIM2P49643 509 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 SLC16A1P53985 500 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 TBL3Q12788 808 aaKnown RBP16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 ANGPT1Q15389 498 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 FAM180AQ6UWF9 173 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 GRK3P35626 688 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 BYSLQ13895 437 aaKnown RBP16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 CACHD1Q5VU97 1274 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 RDM1Q8NG50 284 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 YME1L1Q96TA2 773 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 SCUBE2Q9NQ36 999 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 LIMA1Q9UHB6 759 aaKnown RBP16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 RPLP2P05387 115 aaKnown RBP16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 MAPK1P28482 360 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 ARRDC4Q8NCT1 418 aa16.36■□□□□ 0.21
NUCKS1-201ENST00000367142 KCNQ2O43526 872 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 MRPS15P82914 257 aaKnown RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 GPAT2Q6NUI2 795 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 RIT2Q99578 217 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 PRMT1Q99873 361 aaKnown RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 OSBPL1AQ9BXW6 950 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 NFKBIZQ9BYH8 718 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 PAPOLBQ9NRJ5 636 aaKnown RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 ADGRG1Q9Y653 693 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 PDS5AQ29RF7 1337 aaKnown RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 ZW10O43264 779 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 CSE1LP55060 971 aaKnown RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 SBK1Q52WX2 424 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 C11orf74Q86VG3 221 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 CYFIP2Q96F07 1278 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 VMP1Q96GC9 406 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 L3MBTL3Q96JM7 780 aaPredicted RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 DPP3Q9NY33 737 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 CHI3L1P36222 383 aaPredicted RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 TCF7P36402 384 aaPredicted RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 ALDH6A1Q02252 535 aaKnown RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 CDC16Q13042 620 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 ZNF284Q2VY69 593 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 CARNMT1Q8N4J0 409 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 C7orf25Q9BPX7 421 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 FOXP3Q9BZS1 431 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 DYRK1BQ9Y463 629 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 RASSF9O75901 435 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 WEE2P0C1S8 567 aa16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 TFB1MQ8WVM0 346 aaKnown RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 TRIP4Q15650 581 aaPredicted RBP16.35■□□□□ 0.21
NUCKS1-201ENST00000367142 IFNEQ86WN2 208 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms