RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 NT5DC4Q86YG4 428 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 KSR1Q8IVT5 923 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 RIC8BQ9NVN3 520 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 SMARCAL1Q9NZC9 954 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 ANP32DO95626 131 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC4A1P02730 911 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 CYP11B1P15538 503 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 CAPRIN1Q14444 709 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 MAML3Q96JK9 1138 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 FBXO21O94952 628 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 FAM83AQ86UY5 434 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 TFB1MQ8WVM0 346 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZMAT2Q96NC0 199 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 AGAP1Q9UPQ3 857 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 APOA1P02647 267 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 PDHA1P08559 390 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 ADORA2BP29275 332 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 COPAP53621 1224 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 NME3Q13232 169 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 DNAJC9Q8WXX5 260 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZNF70Q9UC06 446 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 MYH13Q9UKX3 1938 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 NPHP3-ACAD11A0A0J9YXS1 232 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 KITP10721 976 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 OAZ1P54368 228 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 DTX3LQ8TDB6 740 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 IGF2BP3O00425 579 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 OGTO15294 1046 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 SULT1E1P49888 294 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 GRB10Q13322 594 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 TMED1Q13445 227 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 AARS2Q5JTZ9 985 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 RALBP11234 206 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 GRK2P25098 689 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 BAATQ14032 418 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 SH2D3CQ8N5H7 860 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC30A5Q8TAD4 765 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 SEPT3Q9UH03 358 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 MYH1P12882 1939 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 MYH4Q9Y623 1939 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 FKBP1AP62942 108 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 ACAP1Q15027 740 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 UBE2OQ9C0C9 1292 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 RRN3Q9NYV6 651 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 EEF2KO00418 725 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 VHLP40337 213 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 NR2C2P49116 596 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 ERVK-24P63145 666 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 CCNG2Q16589 344 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZNF484Q5JVG2 852 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 PCNX4Q63HM2 1172 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 GPAT2Q6NUI2 795 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 GCNT1Q02742 428 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 DGKDQ16760 1214 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 UGT3A1Q6NUS8 523 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 KAZALD1Q96I82 304 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 GGA2Q9UJY4 613 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 PRKAA2P54646 552 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 MEI1Q5TIA1 1274 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 STKLD1Q8NE28 680 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 ASIC4Q96FT7 647 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 EGFL8Q99944 293 aa12.55□□□□□ -0.4
CDC42BPA-203ENST00000366766 NLRP9Q7RTR0 991 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 DCLRE1BQ9H816 532 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 FAM205AQ6ZU69 1335 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 LRRC14Q15048 493 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 FKBP1CQ5VVH2 108 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZDHHC17Q8IUH5 632 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 SPATA2LQ8IUW3 424 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 EME1Q96AY2 570 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 DSEQ9UL01 958 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 ACOT2P49753 483 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 SUGP1Q8IWZ8 645 aaKnown RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 CFAP99D6REC4 459 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 DFFAO00273 331 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 CST8O60676 142 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 IL1R1P14778 569 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 TRMT5Q32P41 509 aaKnown RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 HP1BP3Q5SSJ5 553 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZNF720Q7Z2F6 126 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 PI4K2BG5E9Z4 385 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 DNAJB2P25686 324 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 MEA1Q16626 185 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 LZICQ8WZA0 190 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 EXT2Q93063 718 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 ILKAPQ9H0C8 392 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 MAGEB16A2A368 324 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 TLR2O60603 784 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 DEAF1O75398 565 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 CALB2P22676 271 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 SERPINB8P50452 374 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 DDIASQ8IXT1 998 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 HIPK4Q8NE63 616 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 IL25Q9H293 177 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 SDR42E2A6NKP2 422 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms