RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 GNAT1P11488 350 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 GRK2P25098 689 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 TRIP10Q15642 601 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRR5LQ6MZQ0 368 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 NIPA1Q7RTP0 329 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 POLD4Q9HCU8 107 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 PDE2AO00408 941 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 MYL2P10916 166 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 PDGFRAP16234 1089 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 PREPLQ4J6C6 727 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 C19orf81C9J6K1 198 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 VCPP55072 806 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 LINC00523Q86TU6 105 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 ADGRA3Q8IWK6 1321 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 KLRC4O43908 158 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 ABHD2P08910 425 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 INTS5Q6P9B9 1019 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 LRRC8BQ6P9F7 803 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 ABLIM1O14639 778 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 CASP2P42575 452 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 EFL1Q7Z2Z2 1120 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 EME1Q96AY2 570 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 TRPC5OSA6NMA1 111 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRKCBP05771 671 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 SLC45A4Q5BKX6 768 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 A1CFQ9NQ94 594 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 GOLGA8RI6L899 631 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 WEE2P0C1S8 567 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 CLEC16AQ2KHT3 1053 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 SCUBE1Q8IWY4 988 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 RTFDC1Q9BY42 306 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 MRPL46Q9H2W6 279 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 CDYLQ9Y232 598 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRKCEQ02156 737 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 ADGRA1Q86SQ6 560 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 LZICQ8WZA0 190 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM193BQ96PV7 902 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 CHMP2BQ9UQN3 213 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 C16orf96A6NNT2 1141 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 TRIM49D1C9J1S8 452 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 ANGPT2O15123 496 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 LCA5LO95447 670 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 CYP2C8P10632 490 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 STAT5BP51692 787 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 PTK6Q13882 451 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 MIIPQ5JXC2 388 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 MTMR9Q96QG7 549 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 NT5C1AQ9BXI3 368 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 BLOC1S4Q9NUP1 217 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 MST1RQ04912 1400 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZCCHC9Q8N567 271 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 DCLK2Q8N568 766 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 NUP98P52948 1817 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 MTFR1Q15390 333 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 CXorf38Q8TB03 319 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 SORCS3Q9UPU3 1222 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 C3orf70A6NLC5 250 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 IL1R1P14778 569 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 BAG6P46379 1132 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZMAT2Q96NC0 199 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRMT7Q9NVM4 692 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-202ENST00000366764 FASTKD1Q53R41 847 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 TTMPQ5BVD1 217 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM151AQ8WW52 585 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM153BP0C7A2 387 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM153CQ494X1 144 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 KCNQ5Q9NR82 932 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM153AQ9UHL3 310 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 RSPH10B2B2RC85 870 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 RSPH10BP0C881 870 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 YWHAHQ04917 246 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 COG2Q14746 738 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 KIF22Q14807 665 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 IQCKQ8N0W5 287 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 RIN3Q8TB24 985 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 BAP1Q92560 729 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 PCMTD2Q9NV79 361 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 ESRRBO95718 433 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 MARSP56192 900 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 VPS72Q15906 364 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 BMT2Q1RMZ1 405 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 IER5Q5VY09 327 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 GPAT2Q6NUI2 795 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 C1orf228Q6PIY5 440 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 SLC26A11Q86WA9 606 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 SLC9A9Q8IVB4 645 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 AP4S1Q9Y587 144 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 SEPT3Q9UH03 358 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 SYCE1LA8MT33 242 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 PSMD7P51665 324 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms