RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 KRT72Q14CN4 511 aa11.05□□□□□ -0.64
CACNA1S-201ENST00000362061 PTPAQ15257 358 aa11.05□□□□□ -0.64
CACNA1S-201ENST00000362061 TAF2Q6P1X5 1199 aa11.05□□□□□ -0.64
CACNA1S-201ENST00000362061 ADSSL1Q8N142 457 aa11.05□□□□□ -0.64
CACNA1S-201ENST00000362061 RSAD1Q9HA92 442 aa11.05□□□□□ -0.64
CACNA1S-201ENST00000362061 C20orf96Q9NUD7 363 aaPredicted RBP11.05□□□□□ -0.64
CACNA1S-201ENST00000362061 PSD3Q9NYI0 1048 aa11.05□□□□□ -0.64
CACNA1S-201ENST00000362061 CDC42BPAQ5VT25 1732 aa11.05□□□□□ -0.64
CACNA1S-201ENST00000362061 MTSS1O43312 755 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 PCDH8O95206 1070 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 MMEP08473 750 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ANTXR2P58335 489 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ACVR2BQ13705 512 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SMTNL2Q2TAL5 461 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 GRAMD1BQ3KR37 738 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 HSP90AA5PQ58FG0 334 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 RFWD2Q8NHY2 731 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 PIP4K2CQ8TBX8 421 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 PDCD2LQ9BRP1 358 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SUPT3HB4E1H0 165 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 MSCO60682 206 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SPAG7O75391 227 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 IL1R1P14778 569 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 RFX5P48382 616 aaPredicted RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 GALCP54803 685 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ARID5BQ14865 1188 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SYTL5Q8TDW5 730 aaPredicted RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 MKNK1Q9BUB5 465 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ATXN3LQ9H3M9 355 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ABCB6Q9NP58 842 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 MLXIPLQ9NP71 852 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 MRPL40Q9NQ50 206 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 PKD2L2Q9NZM6 624 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 CAPN11Q9UMQ6 739 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 RIMBP3CA6NJZ7 1639 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 RIMBP3BA6NNM3 1639 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 RIMBP3Q9UFD9 1639 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 PLSCR1O15162 318 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 CSDE1O75534 798 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 TGFB3P10600 412 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 HIST2H2ACQ16777 129 aaPredicted RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 PPM1LQ5SGD2 360 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 HIST2H2AA3Q6FI13 130 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 CES5AQ6NT32 575 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SARM1Q6SZW1 724 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 PHACTR4Q8IZ21 702 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 TMEM199Q8N511 208 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ELAC2Q9BQ52 826 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SMYD3Q9H7B4 428 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 CAPN10Q9HC96 672 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ZC3H7BQ9UGR2 993 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SLC39A10Q9ULF5 831 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 CEP152O94986 1710 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 QRICH2Q9H0J4 1663 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ADAMTS13Q76LX8 1427 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 MEFVO15553 781 aaPredicted RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 RASIP1Q5U651 963 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 FAM171A1Q5VUB5 890 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 RGMBQ6NW40 437 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SPATA18Q8TC71 538 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 HDAC6Q9UBN7 1215 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 FZD1Q9UP38 647 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 FHOD1Q9Y613 1164 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 P4HA2O15460 535 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 ZNF284Q2VY69 593 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 METTL16Q86W50 562 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 C1orf131Q8NDD1 294 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 SKA1Q96BD8 255 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 CEP19Q96LK0 163 aa11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 MAGEB10Q96LZ2 347 aaPredicted RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 LIMA1Q9UHB6 759 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
CACNA1S-201ENST00000362061 VWA5AO00534 786 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 ATP8B1O43520 1251 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 PMPCBO75439 489 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 BRAFP15056 766 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 NUMBP49757 651 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 CUL2Q13617 745 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 NT5DC4Q86YG4 428 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 NRBF2Q96F24 287 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 NAF1Q96HR8 494 aaKnown RBP11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 RUSC1Q9BVN2 902 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 THEGQ9P2T0 379 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 DCTN4Q9UJW0 460 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 ESYT3A0FGR9 886 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 SLC37A4O43826 429 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 RHOBTB1O94844 696 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 SLC9A1P19634 815 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 CAPZA2P47755 286 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 PSEN2P49810 448 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 CASP8Q14790 479 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 ZNF677Q86XU0 584 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 CYTH2Q99418 400 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 ANGPTL2Q9UKU9 493 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 NCOA3Q9Y6Q9 1424 aa11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 RIMS1Q86UR5 1692 aaKnown RBP11.03□□□□□ -0.64
CACNA1S-201ENST00000362061 C2orf81A6NN90 581 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms