RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 TMEM120AQ9BXJ8 343 aa12.15□□□□□ -0.46
CNOT4-203ENST00000361528 VPS11Q9H270 941 aa12.15□□□□□ -0.46
CNOT4-203ENST00000361528 OLFML3Q9NRN5 406 aa12.15□□□□□ -0.46
CNOT4-203ENST00000361528 KLRF2D3W0D1 207 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 SLC22A1O15245 554 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 TYROBPO43914 113 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 ALOX5P09917 674 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 P4HA1P13674 534 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 CA4P22748 312 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 TCEA1P23193 301 aaKnown RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 FKBP3Q00688 224 aaKnown RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 NANOGP8Q6NSW7 305 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 ADAT2Q7Z6V5 191 aaKnown RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 TRIML2Q8N7C3 387 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 PDZD8Q8NEN9 1154 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 TRUB1Q8WWH5 349 aaKnown RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 DCUN1D1Q96GG9 259 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 ZNF641Q96N77 438 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 GCNAQ96QF7 691 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 CENPOQ9BU64 300 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 FOXP3Q9BZS1 431 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 HIPK3Q9H422 1215 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 KRT6AP02538 564 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 KRT6BP04259 564 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 LDHBP07195 334 aaKnown RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 C6orf222P0C671 652 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 JAK1P23458 1154 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 MAN1A1P33908 653 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 RPA3P35244 121 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 STAT2P52630 851 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 HADHBP55084 474 aaKnown RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 BTKQ06187 659 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 TUBA3CQ13748 450 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 KCTD19Q17RG1 926 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 GRAMD1BQ3KR37 738 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 SEL1L2Q5TEA6 688 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 RNF111Q6ZNA4 994 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 NEK10Q6ZWH5 1172 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 SIX5Q8N196 739 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 LARGE2Q8N3Y3 721 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 TSPAN14Q8NG11 270 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 ATL1Q8WXF7 558 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 THAP11Q96EK4 314 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 RPAP3Q9H6T3 665 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 KCNK13Q9HB14 408 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 DNAJC17Q9NVM6 304 aaKnown RBP12.14□□□□□ -0.47
CNOT4-203ENST00000361528 TLL2Q9Y6L7 1015 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 FLT1P17948 1338 aa12.14□□□□□ -0.47
CNOT4-203ENST00000361528 ANKRD63C9JTQ0 380 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 GOLGA8MH3BSY2 632 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 KCNQ3O43525 872 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SORBS3O60504 671 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 CRTAMO95727 393 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SCG2P13521 617 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ADD2P35612 726 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ALDH1A3P47895 512 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 TUFMP49411 452 aaKnown RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 THOP1P52888 689 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 CDK18Q07002 472 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 HSPA14Q0VDF9 509 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 FUT2Q10981 343 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 CTTNQ14247 550 aaKnown RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 PSMD6Q15008 389 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 UBE3CQ15386 1083 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 BTBD8Q5XKL5 378 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 PIK3AP1Q6ZUJ8 805 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 GPR180Q86V85 440 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 NLRP10Q86W26 655 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ZNF34Q8IZ26 560 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 BBOF1Q8ND07 529 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 GIPC2Q8TF65 315 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 PYDC1Q8WXC3 89 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 EGLN2Q96KS0 407 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 LRRC19Q9H756 370 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 FBXO6Q9NRD1 293 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 MKS1Q9NXB0 559 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 AP4B1Q9Y6B7 739 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ZNF536O15090 1300 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SPATA31A3Q5VYP0 1347 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 KRBA1A5PL33 1030 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 TM9SF1O15321 606 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 TP73O15350 636 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 STAMBPO95630 424 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 DLDP09622 509 aaKnown RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 AP3M2P53677 418 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ATP1A4Q13733 1029 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ACAP1Q15027 740 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SF3B4Q15427 424 aaKnown RBP eCLIP12.13□□□□□ -0.473e-6■■■■□ 24
CNOT4-203ENST00000361528 SLC1A5Q15758 541 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SLC15A2Q16348 729 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 HP1BP3Q5SSJ5 553 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 RARS2Q5T160 578 aaKnown RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 TMTC4Q5T4D3 741 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms