RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CDH8P55286 799 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 SLC29A2Q14542 456 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 PPP1R7Q15435 360 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 ANKRD23Q86SG2 305 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 KATNAL2Q8IYT4 538 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 MAIP1Q8WWC4 291 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 SEC16BQ96JE7 1060 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 ZNF518BQ9C0D4 1074 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 IP6K2Q9UHH9 426 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 R3HDM2Q9Y2K5 976 aaKnown RBP23.93■■□□□ 1.42
LDB1-201ENST00000361198 ITGB3P05106 788 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 TCF4P15884 667 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 SMPD1P17405 629 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 EIF4BP23588 611 aaKnown RBP23.92■■□□□ 1.42
LDB1-201ENST00000361198 CDH5P33151 784 aaPredicted RBP23.92■■□□□ 1.42
LDB1-201ENST00000361198 MAN1A1P33908 653 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 LACTBP83111 547 aaPredicted RBP23.92■■□□□ 1.42
LDB1-201ENST00000361198 ZNF252P-AS1Q0IIN9 211 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 KLF1Q13351 362 aaPredicted RBP23.92■■□□□ 1.42
LDB1-201ENST00000361198 ZNF667Q5HYK9 610 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 RNF187Q5TA31 235 aaPredicted RBP23.92■■□□□ 1.42
LDB1-201ENST00000361198 ANKS1BQ7Z6G8 1248 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 MAML3Q96JK9 1138 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 MCEEQ96PE7 176 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 XPO6Q96QU8 1125 aaKnown RBP23.92■■□□□ 1.42
LDB1-201ENST00000361198 SEMA4AQ9H3S1 761 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 KAT6AQ92794 2004 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 COL1A2P08123 1366 aa23.92■■□□□ 1.42
LDB1-201ENST00000361198 TNFAIP2Q03169 654 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 KRT17Q04695 432 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 CXorf38Q8TB03 319 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 ART4Q93070 314 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 BCO2Q9BYV7 579 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 DCLK3Q9C098 648 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 DRD4P21917 467 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 GRB14Q14449 540 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 SLMAPQ14BN4 828 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 GPR162Q16538 588 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 SLC10A6Q3KNW5 377 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 ATP13A4Q4VNC1 1196 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 DNAJC24Q6P3W2 148 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 NLRP7Q8WX94 980 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 SDCBP2Q9H190 292 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 ADAM7Q9H2U9 754 aa23.91■■□□□ 1.42
LDB1-201ENST00000361198 RARGP13631 454 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 CD19P15391 556 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 YWHAEP62258 255 aaKnown RBP23.9■■□□□ 1.42
LDB1-201ENST00000361198 OGDHQ02218 1023 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 PPARDQ03181 441 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 TNFAIP8L3Q5GJ75 292 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 MARCH8Q5T0T0 291 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 C6orf118Q5T5N4 469 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 CYP4A22Q5TCH4 519 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 ERICH1Q86X53 443 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 MDM1Q8TC05 714 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 OSBPL8Q9BZF1 889 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 ADCY2Q08462 1091 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 DUSP28Q4G0W2 176 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 DENND1BQ6P3S1 775 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 CACNA2D3Q8IZS8 1091 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 EXD1Q8NHP7 514 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 CABS1Q96KC9 395 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 OSBPL7Q9BZF2 842 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 CEP83Q9Y592 693 aa23.9■■□□□ 1.42
LDB1-201ENST00000361198 F8VP50 259 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 H0YHG0 523 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 AGTP01019 485 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 RAD23BP54727 409 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 ORC1Q13415 861 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 GRIK4Q16099 956 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 PPP1R15BQ5SWA1 713 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 GKAP1Q5VSY0 366 aaPredicted RBP23.89■■□□□ 1.42
LDB1-201ENST00000361198 DCUN1D2Q6PH85 259 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 CCDC121Q6ZUS5 278 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 CHMP6Q96FZ7 201 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 ZNF317Q96PQ6 595 aaPredicted RBP23.89■■□□□ 1.42
LDB1-201ENST00000361198 PTPN18Q99952 460 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 ASB7Q9H672 318 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 SMYD3Q9H7B4 428 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 ACTR5Q9H9F9 607 aaPredicted RBP23.89■■□□□ 1.42
LDB1-201ENST00000361198 KLHL11Q9NVR0 708 aa23.89■■□□□ 1.42
LDB1-201ENST00000361198 TP73O15350 636 aa23.89■■□□□ 1.41
LDB1-201ENST00000361198 MMP3P08254 477 aa23.89■■□□□ 1.41
LDB1-201ENST00000361198 CCDC13Q8IYE1 715 aa23.89■■□□□ 1.41
LDB1-201ENST00000361198 SCLT1Q96NL6 688 aa23.89■■□□□ 1.41
LDB1-201ENST00000361198 FAM118BQ9BPY3 351 aa23.89■■□□□ 1.41
LDB1-201ENST00000361198 TINF2Q9BSI4 451 aa23.89■■□□□ 1.41
LDB1-201ENST00000361198 CYTH4Q9UIA0 394 aa23.89■■□□□ 1.41
LDB1-201ENST00000361198 ADCY6O43306 1168 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 RIPK2O43353 540 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 TSPAN1O60635 241 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 ACVR2BQ13705 512 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 PTPN20Q4JDL3 420 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 UBAP2Q5T6F2 1119 aaKnown RBP23.88■■□□□ 1.41
LDB1-201ENST00000361198 ILDR2Q71H61 639 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 TWNKQ96RR1 684 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 GBA2Q9HCG7 927 aaPredicted RBP23.88■■□□□ 1.41
LDB1-201ENST00000361198 TJP2Q9UDY2 1190 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 HMGXB4Q9UGU5 601 aa23.88■■□□□ 1.41
LDB1-201ENST00000361198 RGS16O15492 202 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms