RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 EYA4O95677 639 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 PLEKP08567 350 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 PDGFRAP16234 1089 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 PRLRP16471 622 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 FUKQ8N0W3 1084 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 GIMAP8Q8ND71 665 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 C19orf18Q8NEA5 215 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 HES6Q96HZ4 224 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 AP5M1Q9H0R1 490 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 POLR3FQ9H1D9 316 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 COPG2Q9UBF2 871 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 ZBTB1Q9Y2K1 713 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 EVPLLA8MZ36 301 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 ZNF862O60290 1169 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 RALAP11233 206 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 LCP1P13796 627 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 IL6STP40189 918 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 CHRNB3Q05901 458 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 LRFN2Q9ULH4 789 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 A8MXQ7 604 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 CFAP99D6REC4 459 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 PHKA2P46019 1235 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 HSD17B4P51659 736 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 PDIA5Q14554 519 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 ALX1Q15699 326 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 PREPLQ4J6C6 727 aaPredicted RBP13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 EPHA10Q5JZY3 1008 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 CCDC80Q76M96 950 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 FGD2Q7Z6J4 655 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 STK32AQ8WU08 396 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 FAM167AQ96KS9 214 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 WDR35Q9P2L0 1181 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 SLC39A10Q9ULF5 831 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 AHCYL1O43865 530 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 CST8O60676 142 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 SPON2Q9BUD6 331 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 PLEKHA5Q9HAU0 1116 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 C6orf203Q9P0P8 240 aaPredicted RBP13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 MOSPD1Q9UJG1 213 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 PRG3Q9Y2Y8 225 aaPredicted RBP13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 CAPN6Q9Y6Q1 641 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 CLASP2O75122 1294 aaKnown RBP13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 GLRA3O75311 464 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 RBP3P10745 1247 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 CCNA1P78396 465 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 DUOXA2Q1HG44 320 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 DCAF4L1Q3SXM0 396 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 ERFEQ4G0M1 354 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 TMEM179Q6ZVK1 233 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 ERGIC2Q96RQ1 377 aa13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 REXO4Q9GZR2 422 aaKnown RBP13.96□□□□□ -0.17
CCDC144A-203ENST00000360495 TBKBP1A7MCY6 615 aa13.96□□□□□ -0.18
CCDC144A-203ENST00000360495 CRKLP46109 303 aaKnown RBP13.96□□□□□ -0.18
CCDC144A-203ENST00000360495 EFL1Q7Z2Z2 1120 aaKnown RBP13.96□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM71DQ8N9W8 422 aa13.96□□□□□ -0.18
CCDC144A-203ENST00000360495 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.18
CCDC144A-203ENST00000360495 RERGLQ9H628 205 aa13.96□□□□□ -0.18
CCDC144A-203ENST00000360495 FANCEQ9HB96 536 aa13.96□□□□□ -0.18
CCDC144A-203ENST00000360495 CD274Q9NZQ7 290 aa13.96□□□□□ -0.18
CCDC144A-203ENST00000360495 KANSL1LA0AUZ9 987 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 H7C1W4 665 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 PPEF1O14829 653 aaPredicted RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 SNPHO15079 494 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 GUCA1CO95843 209 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 MMRN1Q13201 1228 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 PWP1Q13610 501 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 TSHZ1Q6ZSZ6 1077 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 USP49Q70CQ1 688 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 LRRC8DQ7L1W4 858 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 TTC30BQ8N4P2 665 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 CALML6Q8TD86 181 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 GPR101Q96P66 508 aaPredicted RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 MRPL4Q9BYD3 311 aaKnown RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 STK39Q9UEW8 545 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 DUSP10Q9Y6W6 482 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 GOLGA8TH3BQL2 631 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 TBC1D12O60347 775 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 PEX5P50542 639 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 RNF219Q5W0B1 726 aaPredicted RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 CROCCP3Q8IVE0 287 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 RMDN3Q96TC7 470 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 ZSWIM1Q9BR11 485 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 BTBD10Q9BSF8 475 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 OSBPL10Q9BXB5 764 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 CDC42EP4Q9H3Q1 356 aaKnown RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 RMI1Q9H9A7 625 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 DNAJC16Q9Y2G8 782 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 IPPQ9Y573 584 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 SFNP31947 248 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 SULT1E1P49888 294 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 ELF3P78545 371 aaPredicted RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 TADA1Q96BN2 335 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 TMEM237Q96Q45 408 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 RABGEF1Q9UJ41 708 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 PPP1R3GB7ZBB8 358 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 PSTPIP1O43586 416 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 APOA4P06727 396 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms