RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SGO2Q562F6 1265 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 SLFN11Q7Z7L1 901 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 PDCL2Q8N4E4 241 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 TRIM11Q96F44 468 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 VCPIP1Q96JH7 1222 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 GOLPH3Q9H4A6 298 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 ELAC1Q9H777 363 aaKnown RBP24.62■■□□□ 1.53
SDF4-202ENST00000360001 HCRTO43612 131 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 MMP8P22894 467 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 C1QBPQ07021 282 aaKnown RBP24.62■■□□□ 1.53
SDF4-202ENST00000360001 LRRC26Q2I0M4 334 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 C2CD6Q53TS8 623 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 ACOT1Q86TX2 421 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 ADGRF2Q8IZF7 708 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 C12orf29Q8N999 325 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 DDX27Q96GQ7 796 aaKnown RBP24.62■■□□□ 1.53
SDF4-202ENST00000360001 C11orf70Q9BRQ4 267 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 TLR10Q9BXR5 811 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 AVENQ9NQS1 362 aaPredicted RBP24.62■■□□□ 1.53
SDF4-202ENST00000360001 ADAM22Q9P0K1 906 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 CDC23Q9UJX2 597 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 CEP83Q9Y592 693 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 A8MXQ7 604 aa24.61■■□□□ 1.53
SDF4-202ENST00000360001 NCK2O43639 380 aa24.61■■□□□ 1.53
SDF4-202ENST00000360001 BUB1BO60566 1050 aaPredicted RBP24.61■■□□□ 1.53
SDF4-202ENST00000360001 MICAL2O94851 1124 aa24.61■■□□□ 1.53
SDF4-202ENST00000360001 RRM1P23921 792 aa24.61■■□□□ 1.53
SDF4-202ENST00000360001 GNL1P36915 607 aaPredicted RBP24.61■■□□□ 1.53
SDF4-202ENST00000360001 MEI1Q5TIA1 1274 aa24.61■■□□□ 1.53
SDF4-202ENST00000360001 MYRIPQ8NFW9 859 aa24.61■■□□□ 1.53
SDF4-202ENST00000360001 SENP8Q96LD8 212 aa24.61■■□□□ 1.53
SDF4-202ENST00000360001 NUP85Q9BW27 656 aa24.61■■□□□ 1.53
SDF4-202ENST00000360001 WARSP23381 471 aaKnown RBP24.6■■□□□ 1.53
SDF4-202ENST00000360001 LMO2P25791 158 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 AARSP49588 968 aaKnown RBP eCLIP24.6■■□□□ 1.532e-7■■■■■ 46.4
SDF4-202ENST00000360001 TUBB2AQ13885 445 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 NOMO2Q5JPE7 1267 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 MMS22LQ6ZRQ5 1243 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 CALR3Q96L12 384 aaKnown RBP24.6■■□□□ 1.53
SDF4-202ENST00000360001 UROC1Q96N76 676 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 TUBB2BQ9BVA1 445 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 SNX25Q9H3E2 840 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 DPEP3Q9H4B8 488 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 TMEM39AQ9NV64 488 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 UVRAGQ9P2Y5 699 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 SNX12Q9UMY4 172 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 STXBP5LQ9Y2K9 1186 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 SAR1BQ9Y6B6 198 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 CLTBP09497 229 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 FAM163BP0C2L3 166 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 LCLAT1Q6UWP7 414 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 CD300LGQ6UXG3 332 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 OSTM1Q86WC4 334 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 CYTH4Q9UIA0 394 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 TTC3P53804 2025 aa24.6■■□□□ 1.53
SDF4-202ENST00000360001 B4GALT3O60512 393 aa24.59■■□□□ 1.53
SDF4-202ENST00000360001 PDGFRBP09619 1106 aa24.59■■□□□ 1.53
SDF4-202ENST00000360001 WSCD1Q658N2 575 aa24.59■■□□□ 1.53
SDF4-202ENST00000360001 LLGL2Q6P1M3 1020 aa24.59■■□□□ 1.53
SDF4-202ENST00000360001 DAAM2Q86T65 1068 aa24.59■■□□□ 1.53
SDF4-202ENST00000360001 CRYBG2Q8N1P7 616 aa24.59■■□□□ 1.53
SDF4-202ENST00000360001 ZNF564Q8TBZ8 553 aaPredicted RBP24.59■■□□□ 1.53
SDF4-202ENST00000360001 ABCB6Q9NP58 842 aa24.59■■□□□ 1.53
SDF4-202ENST00000360001 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.58■■□□□ 1.53
SDF4-202ENST00000360001 TERF1P54274 439 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 DSC1Q08554 894 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 STILQ15468 1287 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 DEFB128Q7Z7B8 93 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 PHLDB2Q86SQ0 1253 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 SYCE1Q8N0S2 351 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 CRIPAKQ8N1N5 446 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 URGCPQ8TCY9 931 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 TMEM106CQ9BVX2 250 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 TSPAN16Q9UKR8 245 aa24.58■■□□□ 1.53
SDF4-202ENST00000360001 MKI67P46013 3256 aaKnown RBP24.58■■□□□ 1.53
SDF4-202ENST00000360001 M0QYV0 167 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 GABRDO14764 452 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 SRGAP2O75044 1071 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 B3GAT3O94766 335 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 DDHD2O94830 711 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 TIGD5Q53EQ6 642 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 PPP1R26Q5T8A7 1209 aaPredicted RBP24.58■■□□□ 1.52
SDF4-202ENST00000360001 LIN9Q5TKA1 542 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 NECAB2Q7Z6G3 386 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 ZNF280BQ86YH2 543 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 VWCEQ96DN2 955 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 TBC1D13Q9NVG8 400 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 PACSIN2Q9UNF0 486 aaPredicted RBP24.58■■□□□ 1.52
SDF4-202ENST00000360001 PCDHB7Q9Y5E2 793 aa24.58■■□□□ 1.52
SDF4-202ENST00000360001 SLU7O95391 586 aaKnown RBP24.57■■□□□ 1.52
SDF4-202ENST00000360001 PRLRP16471 622 aa24.57■■□□□ 1.52
SDF4-202ENST00000360001 GPD2P43304 727 aa24.57■■□□□ 1.52
SDF4-202ENST00000360001 DSTYKQ6XUX3 929 aa24.57■■□□□ 1.52
SDF4-202ENST00000360001 LPIN3Q9BQK8 851 aa24.57■■□□□ 1.52
SDF4-202ENST00000360001 FAM49BQ9NUQ9 324 aa24.57■■□□□ 1.52
SDF4-202ENST00000360001 KANSL3Q9P2N6 904 aa24.57■■□□□ 1.52
SDF4-202ENST00000360001 CALB1P05937 261 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 PTPN20Q4JDL3 420 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 ARHGAP17Q68EM7 881 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 PLEKHA7Q6IQ23 1121 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms