RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ERICH1Q86X53 443 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 CCDC50Q8IVM0 306 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 NIPA2Q8N8Q9 360 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 C3orf20Q8ND61 904 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 CXorf38Q8TB03 319 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 FBXO25Q8TCJ0 367 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 TFAP2BQ92481 460 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 CPB2Q96IY4 423 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 RBM41Q96IZ5 413 aaKnown RBP15.78■□□□□ 0.12
GABPB1-202ENST00000359031 SCLT1Q96NL6 688 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 CAPS2Q9BXY5 557 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 DCLK3Q9C098 648 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 FEZ2Q9UHY8 353 aaPredicted RBP15.78■□□□□ 0.12
GABPB1-202ENST00000359031 ITGA11Q9UKX5 1188 aa15.78■□□□□ 0.12
GABPB1-202ENST00000359031 MEFVO15553 781 aaPredicted RBP15.77■□□□□ 0.12
GABPB1-202ENST00000359031 GAS8O95995 478 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 ITGB3P05106 788 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 NUDT17P0C025 328 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 TM4SF4P48230 202 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 PTK6Q13882 451 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 PIGHQ14442 188 aaPredicted RBP15.77■□□□□ 0.12
GABPB1-202ENST00000359031 DCAF4L1Q3SXM0 396 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 MARCH8Q5T0T0 291 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 TTC39CQ8N584 583 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 ART4Q93070 314 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 PPP1R16BQ96T49 567 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 CWC15Q9P013 229 aaKnown RBP15.77■□□□□ 0.12
GABPB1-202ENST00000359031 WHRNQ9P202 907 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 USTQ9Y2C2 406 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 ATP8A1Q9Y2Q0 1164 aa15.77■□□□□ 0.12
GABPB1-202ENST00000359031 A0A1B0GUA9 196 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 CD19P15391 556 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 NR1D1P20393 614 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 GRM5P41594 1212 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 PMS2P54278 862 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 RAD23BP54727 409 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 CDC42EP1Q00587 391 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 KRT17Q04695 432 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 CALCOCO2Q13137 446 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 SLMAPQ14BN4 828 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 SLC10A6Q3KNW5 377 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 WDR72Q3MJ13 1102 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 KCTD16Q68DU8 428 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 DENND1BQ6P3S1 775 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 DCUN1D2Q6PH85 259 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 RCOR2Q8IZ40 523 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 WDTC1Q8N5D0 677 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 SH2D3CQ8N5H7 860 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 ARFGAP2Q8N6H7 521 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 C1orf54Q8WWF1 131 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 ACAP3Q96P50 834 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 MCEEQ96PE7 176 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 OSBPL8Q9BZF1 889 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 SDCBP2Q9H190 292 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 PABPC3Q9H361 631 aaKnown RBP15.76■□□□□ 0.11
GABPB1-202ENST00000359031 CILPO75339 1184 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 GJB6O95452 261 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 RALAP11233 206 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 PTPN7P35236 360 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 SSR1P43307 286 aaKnown RBP15.76■□□□□ 0.11
GABPB1-202ENST00000359031 RAP1GAPP47736 663 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 KCNJ1P48048 391 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 RPL7AP62424 266 aaKnown RBP15.76■□□□□ 0.11
GABPB1-202ENST00000359031 ZNF252P-AS1Q0IIN9 211 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 PCBP1Q15365 356 aaKnown RBP eCLIP15.76■□□□□ 0.11
GABPB1-202ENST00000359031 CCNG2Q16589 344 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 HOOK3Q86VS8 718 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 KIAA0319LQ8IZA0 1049 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 NPLOC4Q8TAT6 608 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 PTPN18Q99952 460 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 HERPUD2Q9BSE4 406 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 SMYD3Q9H7B4 428 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 CHST7Q9NS84 486 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 WDR35Q9P2L0 1181 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 PTPN22Q9Y2R2 807 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 DERAQ9Y315 318 aa15.76■□□□□ 0.11
GABPB1-202ENST00000359031 PDCD11Q14690 1871 aaKnown RBP15.75■□□□□ 0.11
GABPB1-202ENST00000359031 O00370 1275 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 EIF3HO15372 352 aaKnown RBP eCLIP15.75■□□□□ 0.11
GABPB1-202ENST00000359031 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
GABPB1-202ENST00000359031 COPS2P61201 443 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 RBP5P82980 135 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 PTPN11Q06124 597 aaPredicted RBP15.75■□□□□ 0.11
GABPB1-202ENST00000359031 PTPN20Q4JDL3 420 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 DAB2IPQ5VWQ8 1189 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 DENND2CQ68D51 928 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 LRRC31Q6UY01 552 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 CROCCP2Q86T23 111 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 SLC4A11Q8NBS3 891 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 OR2W6PQ8NHA6 318 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 ATL2Q8NHH9 583 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 FNIP1Q8TF40 1166 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 SNF8Q96H20 258 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 HPDLQ96IR7 371 aa15.75■□□□□ 0.11
GABPB1-202ENST00000359031 DDX56Q9NY93 547 aaKnown RBP15.75■□□□□ 0.11
GABPB1-202ENST00000359031 F2P00734 622 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 KRT1P04264 644 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 ITIH2P19823 946 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 GJC1P36383 396 aa15.74■□□□□ 0.11
GABPB1-202ENST00000359031 IRAK1P51617 712 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms