RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CCT5P48643 541 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 CENPCQ03188 943 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 ARRDC4Q8NCT1 418 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 RNPC3Q96LT9 517 aaKnown RBP13.41□□□□□ -0.26
GGPS1-202ENST00000358966 CELF4Q9BZC1 486 aaKnown RBP13.41□□□□□ -0.26
GGPS1-202ENST00000358966 ADAM22Q9P0K1 906 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 CYTH4Q9UIA0 394 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 RAD51CO43502 376 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 TCF4P15884 667 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 AP3M2P53677 418 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
GGPS1-202ENST00000358966 DENND1BQ6P3S1 775 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 SLC27A1Q6PCB7 646 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 WDTC1Q8N5D0 677 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 CD99L2Q8TCZ2 262 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 WHAMMQ8TF30 809 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 ZFP42Q96MM3 310 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 ELOVL4Q9GZR5 314 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 ACBD3Q9H3P7 528 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 KLHL11Q9NVR0 708 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 CNTN6Q9UQ52 1028 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 SCN10AQ9Y5Y9 1956 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 ECEL1O95672 775 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 SURF1Q15526 300 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 MFSD14CQ5VZR4 134 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 NOTUMQ6P988 496 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 HDXQ7Z353 690 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 ZNF572Q7Z3I7 529 aaPredicted RBP13.41□□□□□ -0.26
GGPS1-202ENST00000358966 ZDHHC14Q8IZN3 488 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 PARP2Q9UGN5 583 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 USTQ9Y2C2 406 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 PGRMC1O00264 195 aaKnown RBP13.4□□□□□ -0.26
GGPS1-202ENST00000358966 KRIT1O00522 736 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 ASGR1P07306 291 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 PYGMP11217 842 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 RAD23BP54727 409 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 CCDC142Q17RM4 750 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 HSP90B2PQ58FF3 399 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 ARMCX6Q7L4S7 300 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 FAM228AQ86W67 206 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 MMGT1Q8N4V1 131 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
GGPS1-202ENST00000358966 XPNPEP3Q9NQH7 507 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 AMACRQ9UHK6 382 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 NME7Q9Y5B8 376 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
GGPS1-202ENST00000358966 RARBP10826 455 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 GRM5P41594 1212 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 BPIFB4P59827 614 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 SP3Q02447 781 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 GUCY2DQ02846 1103 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 SOX4Q06945 474 aaPredicted RBP13.4□□□□□ -0.27
GGPS1-202ENST00000358966 PTP4A2Q12974 167 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 KCNA10Q16322 511 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 ZNF618Q5T7W0 954 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 TWF2Q6IBS0 349 aaKnown RBP13.4□□□□□ -0.27
GGPS1-202ENST00000358966 DDX42Q86XP3 938 aaKnown RBP eCLIP13.4□□□□□ -0.27
GGPS1-202ENST00000358966 RPGRIP1Q96KN7 1286 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 SNX27Q96L92 541 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.4□□□□□ -0.27
GGPS1-202ENST00000358966 ASB7Q9H672 318 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 SNX9Q9Y5X1 595 aa13.4□□□□□ -0.27
GGPS1-202ENST00000358966 EBAG9O00559 213 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 HEXIM1O94992 359 aaKnown RBP13.39□□□□□ -0.27
GGPS1-202ENST00000358966 NOGQ13253 232 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 SLC4A11Q8NBS3 891 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 IFT81Q8WYA0 676 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 LPPQ93052 612 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 CDY2AQ9Y6F7 541 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 GRIN2DO15399 1336 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 GOLGA8SH3BPF8 625 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 SEPT4O43236 478 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 ADAMTS4O75173 837 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 CARSP49589 748 aaKnown RBP13.39□□□□□ -0.27
GGPS1-202ENST00000358966 GJA9P57773 515 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 BRD3Q15059 726 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 SLC5A9Q2M3M2 681 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 UBXN11Q5T124 520 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 WLSQ5T9L3 541 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 C11orf63Q6NUN7 778 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 UBA3Q8TBC4 463 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 FAM71BQ8TC56 605 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 FAM118BQ9BPY3 351 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 MRPL45Q9BRJ2 306 aaKnown RBP13.39□□□□□ -0.27
GGPS1-202ENST00000358966 HERPUD2Q9BSE4 406 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 EPB41L5Q9HCM4 733 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 TRMT13Q9NUP7 481 aaKnown RBP13.39□□□□□ -0.27
GGPS1-202ENST00000358966 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
GGPS1-202ENST00000358966 PECAM1P16284 738 aaPredicted RBP13.38□□□□□ -0.27
GGPS1-202ENST00000358966 NDST1P52848 882 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 NAA25Q14CX7 972 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 PTPN20Q4JDL3 420 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 ATP13A4Q4VNC1 1196 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 ZNF677Q86XU0 584 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 CD101Q93033 1021 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 PBKQ96KB5 322 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms