RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 CEP83Q9Y592 693 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 IGF2BP3O00425 579 aaKnown RBP eCLIP9.06□□□□□ -0.96
RFX3-202ENST00000358730 NQO1P15559 274 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 GCAP28676 217 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 FOXN2P32314 431 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 CDKN2BP42772 138 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 DYNLT1P63172 113 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 NR1H3Q13133 447 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 PIGHQ14442 188 aaPredicted RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 ZPBP2Q6X784 338 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 KIF2BQ8N4N8 673 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 FITM2Q8N6M3 262 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 KLHL29Q96CT2 875 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 MRRFQ96E11 262 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 MRPL4Q9BYD3 311 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 PRKAG3Q9UGI9 489 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 AGTPBP1Q9UPW5 1226 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 TCRBV5S1A1TA0A578 114 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 GOLGA8SH3BPF8 625 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 GOLGA8MH3BSY2 632 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 TOM1L1O75674 476 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 WEE2P0C1S8 567 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 PSMC4P43686 418 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 AP3M2P53677 418 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 WDR4P57081 412 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 TFAMQ00059 246 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 TAP1Q03518 808 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 BNIP1Q12981 228 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 TRPC3Q13507 836 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 OASLQ15646 514 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 SMTNL2Q2TAL5 461 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 ZNF699Q32M78 642 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 DALRD3Q5D0E6 543 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 WLSQ5T9L3 541 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 RNASEH2BQ5TBB1 312 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 CENPUQ71F23 418 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 ERICH1Q86X53 443 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 DNERQ8NFT8 737 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 PRPF31Q8WWY3 499 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 PCYT2Q99447 389 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 PITPNM3Q9BZ71 974 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 TRABDQ9H4I3 376 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 PCDH9Q9HC56 1237 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 DDX56Q9NY93 547 aaKnown RBP9.06□□□□□ -0.96
RFX3-202ENST00000358730 SHOC2Q9UQ13 582 aa9.06□□□□□ -0.96
RFX3-202ENST00000358730 IGKV6D-21A0A0A0MT36 114 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 NFKBIEO00221 500 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 FAM189A1O60320 539 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 FARP2O94887 1054 aaPredicted RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 ITGAVP06756 1048 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 PSMA2P25787 234 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 MARK3P27448 753 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 PTPN7P35236 360 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 ALDH5A1P51649 535 aaPredicted RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 STAT5BP51692 787 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 MGAT5Q09328 741 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 PDIA2Q13087 525 aaKnown RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 DNAJC3Q13217 504 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 NEDD9Q14511 834 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 TARBP2Q15633 366 aaKnown RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 PKN2Q16513 984 aaKnown RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 WDR72Q3MJ13 1102 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 ANGEL2Q5VTE6 544 aaKnown RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 C4orf33Q8N1A6 199 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 TFAP2BQ92481 460 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 SPOCK2Q92563 424 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 NKD2Q969F2 451 aaPredicted RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 SMC6Q96SB8 1091 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 ZWILCHQ9H900 591 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 UBN1Q9NPG3 1134 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 NRBP2Q9NSY0 501 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 MSCO60682 206 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 PEX10O60683 326 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 BANF1O75531 89 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 ASMTLO95671 621 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 SRGAP2CP0DJJ0 459 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 TCF7P36402 384 aaPredicted RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 EFNA5P52803 228 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 GSCP56915 257 aaPredicted RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 SPARCL1Q14515 664 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 HIF1AQ16665 826 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 DUOXA2Q1HG44 320 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 SGSM1Q2NKQ1 1148 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 FAM160B1Q5W0V3 765 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 ECHDC2Q86YB7 292 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 TDRPQ86YL5 185 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 ANKMY2Q8IV38 441 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 GPATCH11Q8N954 259 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 GIMAP7Q8NHV1 300 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 PRCCQ92733 491 aaPredicted RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 GRAMD1AQ96CP6 724 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 THOC1Q96FV9 657 aaKnown RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 MYCBPQ99417 103 aaPredicted RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 ADAM33Q9BZ11 813 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 ZNF518BQ9C0D4 1074 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 HOXC10Q9NYD6 342 aa9.05□□□□□ -0.96
RFX3-202ENST00000358730 MCM8Q9UJA3 840 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms