RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 HIST2H2ACQ16777 129 aaPredicted RBP10.98□□□□□ -0.65
FXR1-202ENST00000357559 HIST2H2AA3Q6FI13 130 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 SYNE4Q8N205 404 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 TNIP2Q8NFZ5 429 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 BLOC1S6Q9UL45 172 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 MAST1Q9Y2H9 1570 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 GCC2Q8IWJ2 1684 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 TARSP26639 723 aaKnown RBP10.98□□□□□ -0.65
FXR1-202ENST00000357559 RGS4P49798 205 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 H2AFYO75367 372 aaKnown RBP10.98□□□□□ -0.65
FXR1-202ENST00000357559 STAU1O95793 577 aaKnown RBP10.98□□□□□ -0.65
FXR1-202ENST00000357559 CSTF3Q12996 717 aaKnown RBP10.98□□□□□ -0.65
FXR1-202ENST00000357559 TTC39BQ5VTQ0 682 aaPredicted RBP10.98□□□□□ -0.65
FXR1-202ENST00000357559 STAMBPL1Q96FJ0 436 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 PI4K2AQ9BTU6 479 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 ZNF304Q9HCX3 659 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 METTL5Q9NRN9 209 aaKnown RBP10.98□□□□□ -0.65
FXR1-202ENST00000357559 NAGPAQ9UK23 515 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 USP27XA6NNY8 438 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 WEE2P0C1S8 567 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 HMGCS2P54868 508 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 CCNIQ14094 377 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 PRAMEF18Q5VWM3 479 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 AGPAT1Q99943 283 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 CYP4F12Q9HCS2 524 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 PDZK1P1A8MUH7 402 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 TDP2O95551 362 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 ACADMP11310 421 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 ITGA3P26006 1051 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 KLHL17Q6TDP4 642 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 HASPINQ8TF76 798 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 CCDC3Q9BQI4 270 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 FBXO40Q9UH90 709 aa10.98□□□□□ -0.65
FXR1-202ENST00000357559 ATP6V1B2P21281 511 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 UTS2BQ765I0 119 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 TPD52L3Q96J77 140 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 TRPC4Q9UBN4 977 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 NEU2Q9Y3R4 380 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 ABCA10Q8WWZ4 1543 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 LRRIQ3A6PVS8 624 aaPredicted RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 TRAPPC3O43617 180 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 ITGB6P18564 788 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 TNNI3P19429 210 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 CAMK2GQ13555 558 aaPredicted RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 GRAPQ13588 217 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 LPIN1Q14693 890 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 NBPF9Q3BBW0 867 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 MTHFD1LQ6UB35 978 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 GRAPLQ8TC17 118 aaPredicted RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 SPATA18Q8TC71 538 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 HERC5Q9UII4 1024 aaKnown RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 GNG14A0A1W2PPG7 69 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 RTN2O75298 545 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 PDGFRAP16234 1089 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 RRM2P31350 389 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 GLRBP48167 497 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 TRIM16LQ309B1 348 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 WDR36Q8NI36 951 aaKnown RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 ARHGEF26Q96DR7 871 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 MASTLQ96GX5 879 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 TDRKHQ9Y2W6 561 aaKnown RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 ZNF23P17027 643 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 PRDX5P30044 214 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 RESTQ13127 1097 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 MIIPQ5JXC2 388 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 EPHX4Q8IUS5 362 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 NEUROD4Q9HD90 331 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 TBC1D22BQ9NU19 505 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 CHURC1-FNTBB4DL54 471 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 EIF2S1P05198 315 aaKnown RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 FNTAP49354 379 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 ZNF157P51786 506 aaPredicted RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 SEMA3FQ13275 785 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 C9orf72Q96LT7 481 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 TMEM47Q9BQJ4 181 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 FAXCQ5TGI0 409 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 C12orf60Q5U649 245 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 SENP7Q9BQF6 1050 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 RUVBL2Q9Y230 463 aaKnown RBP10.97□□□□□ -0.65
FXR1-202ENST00000357559 KIAA0232Q92628 1395 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 RRN3P2A6NIE6 340 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 CYP2B6P20813 491 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 LRRC8DQ7L1W4 858 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 UBASH3BQ8TF42 649 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 SEPT3Q9UH03 358 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 NDOR1Q9UHB4 597 aa10.97□□□□□ -0.65
FXR1-202ENST00000357559 YY1P25490 414 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 KRT20P35900 424 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 STARD3Q14849 445 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 DENND5BQ6ZUT9 1274 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 FAM71DQ8N9W8 422 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 LRRC1Q9BTT6 524 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 TRIM10Q9UDY6 481 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 HNRNPRO43390 633 aaKnown RBP10.96□□□□□ -0.65
FXR1-202ENST00000357559 POLR1DQ9Y2S0 133 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 DYNC1LI2O43237 492 aaPredicted RBP10.96□□□□□ -0.65
FXR1-202ENST00000357559 NCF4Q15080 339 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 GPRASP2Q96D09 838 aa10.96□□□□□ -0.65
FXR1-202ENST00000357559 OMA1Q96E52 524 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms