RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 SMTNL1A8MU46 457 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 GOLGA6L19H0YKK7 550 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 FANCGO15287 622 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 LMNAP02545 664 aaKnown RBP7.66□□□□□ -1.18
VPS13A-201ENST00000355766 TGFB3P10600 412 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 AOC1P19801 751 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 ATP2B1P20020 1258 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 STAT6P42226 847 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 TECP42680 631 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 SP2Q02086 613 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 IL17AQ16552 155 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 ANO6Q4KMQ2 910 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 COBLL1Q53SF7 1204 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 FBXO47Q5MNV8 452 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 ZBTB37Q5TC79 503 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 KRT79Q5XKE5 535 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 LLGL2Q6P1M3 1020 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 TAF2Q6P1X5 1199 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 SLC23A3Q6PIS1 610 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 RUFY4Q6ZNE9 571 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 TSHZ1Q6ZSZ6 1077 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-201ENST00000355766 KIAA2013Q8IYS2 634 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 ERMNQ8TAM6 284 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 ETNPPLQ8TBG4 499 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 MICAL1Q8TDZ2 1067 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 SMARCE1Q969G3 411 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 LENG9Q96B70 501 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 APOL5Q9BWW9 433 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 TMEM60Q9H2L4 133 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 SEMA4AQ9H3S1 761 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 MLXIPQ9HAP2 919 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 PRDM7Q9NQW5 492 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 KBTBD4Q9NVX7 518 aa7.66□□□□□ -1.18
VPS13A-201ENST00000355766 ZNF215Q9UL58 517 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-201ENST00000355766 NOP56O00567 594 aaKnown RBP7.65□□□□□ -1.18
VPS13A-201ENST00000355766 MAFGO15525 162 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 SLC37A4O43826 429 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 TDP2O95551 362 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 EOMESO95936 686 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 CFBP00751 764 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 TPM3P06753 285 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 ASGR2P07307 311 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 STAG3L1P0CL83 205 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 MYCLP12524 364 aaPredicted RBP7.65□□□□□ -1.18
VPS13A-201ENST00000355766 HOXB8P17481 243 aaPredicted RBP7.65□□□□□ -1.18
VPS13A-201ENST00000355766 GATMP50440 423 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 GRIN1Q05586 938 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 MORC3Q14149 939 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 IQCB1Q15051 598 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 PGM5Q15124 567 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 UBE2SQ16763 222 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 NKPD1Q17RQ9 610 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 TMEM119Q4V9L6 283 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 CEP55Q53EZ4 464 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 RRAGBQ5VZM2 374 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 PCNX4Q63HM2 1172 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 USP17L6PQ6QN14 398 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 RSPH3Q86UC2 560 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 CABP7Q86V35 215 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 SPACA3Q8IXA5 215 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 IL31RAQ8NI17 732 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 NRCAMQ92823 1304 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 HAS1Q92839 578 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 CCDC47Q96A33 483 aaKnown RBP7.65□□□□□ -1.18
VPS13A-201ENST00000355766 DHX58Q96C10 678 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 PAGE5Q96GU1 130 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 EPSTI1Q96J88 318 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 NECTIN4Q96NY8 510 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 RIT2Q99578 217 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 FTHL17Q9BXU8 183 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 POMKQ9H5K3 350 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 TMEM260Q9NX78 707 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 LRWD1Q9UFC0 647 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 CDH22Q9UJ99 828 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 PCDHA12Q9UN75 941 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 PCDHA5Q9Y5H7 936 aa7.65□□□□□ -1.18
VPS13A-201ENST00000355766 IGLV3-22A0A075B6J6 115 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 PVALEFA0A1B0GWK0 134 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 BECN2A8MW95 431 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 MEIS1O00470 390 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 ADAMTS3O15072 1205 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 EDIL3O43854 480 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 FGF18O76093 207 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 CCND2P30279 289 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 CD52P31358 61 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 ERVFC1P60507 584 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 MYL5Q02045 173 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 SPIRE1Q08AE8 756 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 PPP2R5CQ13362 524 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 LRRC14Q15048 493 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 DPCR1Q3MIW9 517 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 PLPP4Q5VZY2 271 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 METTL7BQ6UX53 244 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 ZDHHC14Q8IZN3 488 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 TDRD5Q8NAT2 981 aaKnown RBP7.64□□□□□ -1.19
VPS13A-201ENST00000355766 DTWD2Q8NBA8 298 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 RDM1Q8NG50 284 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 RASSF8Q8NHQ8 419 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 CYP2W1Q8TAV3 490 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms