RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 A0A0U1RQG5 324 aaPredicted RBP27.22■■□□□ 1.95
CLK2-201ENST00000355560 RPS6KA5O75582 802 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 VDRP11473 427 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 PLA2G4AP47712 749 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 XKR4Q5GH76 650 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 CCSAPQ6IQ19 270 aaPredicted RBP27.22■■□□□ 1.95
CLK2-201ENST00000355560 DPH6Q7L8W6 267 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 AENQ8WTP8 325 aaKnown RBP27.22■■□□□ 1.95
CLK2-201ENST00000355560 MCEEQ96PE7 176 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 NT5C1AQ9BXI3 368 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 SENP6Q9GZR1 1112 aaPredicted RBP27.22■■□□□ 1.95
CLK2-201ENST00000355560 STRIP2Q9ULQ0 834 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 MICAL2O94851 1124 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 HMGCRP04035 888 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 KCNE1P15382 129 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 CST5P28325 142 aaPredicted RBP27.22■■□□□ 1.95
CLK2-201ENST00000355560 NFX1Q12986 1120 aaKnown RBP27.22■■□□□ 1.95
CLK2-201ENST00000355560 SGO2Q562F6 1265 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 SESTD1Q86VW0 696 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 ARRDC4Q8NCT1 418 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 ST3GAL5Q9UNP4 418 aa27.22■■□□□ 1.95
CLK2-201ENST00000355560 M0QYV0 167 aa27.21■■□□□ 1.95
CLK2-201ENST00000355560 O00370 1275 aa27.21■■□□□ 1.95
CLK2-201ENST00000355560 XPOTO43592 962 aaKnown RBP27.21■■□□□ 1.95
CLK2-201ENST00000355560 CD4P01730 458 aa27.21■■□□□ 1.95
CLK2-201ENST00000355560 CHRNA1P02708 482 aa27.21■■□□□ 1.95
CLK2-201ENST00000355560 ATF7P17544 494 aaPredicted RBP27.21■■□□□ 1.95
CLK2-201ENST00000355560 C3orf20Q8ND61 904 aa27.21■■□□□ 1.95
CLK2-201ENST00000355560 MRPL45Q9BRJ2 306 aaKnown RBP27.21■■□□□ 1.95
CLK2-201ENST00000355560 PLVAPQ9BX97 442 aa27.21■■□□□ 1.95
CLK2-201ENST00000355560 CFHR5Q9BXR6 569 aa27.21■■□□□ 1.95
CLK2-201ENST00000355560 IP6K2Q9UHH9 426 aa27.21■■□□□ 1.95
CLK2-201ENST00000355560 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.21■■□□□ 1.95
CLK2-201ENST00000355560 TMEM191CA6NGB0 347 aa27.2■■□□□ 1.95
CLK2-201ENST00000355560 HSPA6P17066 643 aa27.2■■□□□ 1.95
CLK2-201ENST00000355560 HOXD10P28358 340 aa27.2■■□□□ 1.95
CLK2-201ENST00000355560 DCUN1D2Q6PH85 259 aa27.2■■□□□ 1.95
CLK2-201ENST00000355560 CCDC26Q8TAB7 109 aa27.2■■□□□ 1.95
CLK2-201ENST00000355560 GRIN2DO15399 1336 aa27.2■■□□□ 1.94
CLK2-201ENST00000355560 CNGA2Q16280 664 aa27.2■■□□□ 1.94
CLK2-201ENST00000355560 FBXO47Q5MNV8 452 aa27.2■■□□□ 1.94
CLK2-201ENST00000355560 PCSK9Q8NBP7 692 aaKnown RBP27.2■■□□□ 1.94
CLK2-201ENST00000355560 TSPAN18Q96SJ8 248 aa27.2■■□□□ 1.94
CLK2-201ENST00000355560 CPXM1Q96SM3 734 aa27.2■■□□□ 1.94
CLK2-201ENST00000355560 TJP2Q9UDY2 1190 aa27.2■■□□□ 1.94
CLK2-201ENST00000355560 USTQ9Y2C2 406 aa27.2■■□□□ 1.94
CLK2-201ENST00000355560 MAN1A1P33908 653 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 CARSP49589 748 aaKnown RBP27.19■■□□□ 1.94
CLK2-201ENST00000355560 EPHB4P54760 987 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 PPP2R5EQ16537 467 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 PTGISQ16647 500 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 MAATS1Q7Z4T9 603 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 SLC13A5Q86YT5 568 aaPredicted RBP27.19■■□□□ 1.94
CLK2-201ENST00000355560 IFT81Q8WYA0 676 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 GOLGA2P5Q9HBQ8 144 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 PIRO00625 290 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 SOX4Q06945 474 aaPredicted RBP27.19■■□□□ 1.94
CLK2-201ENST00000355560 PPP1R15BQ5SWA1 713 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 MAP3K21Q5TCX8 1036 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 RPAINQ86UA6 219 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 CASKIN2Q8WXE0 1202 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 DDX27Q96GQ7 796 aaKnown RBP27.19■■□□□ 1.94
CLK2-201ENST00000355560 SYNCQ9H7C4 482 aa27.19■■□□□ 1.94
CLK2-201ENST00000355560 DDX20Q9UHI6 824 aaKnown RBP27.19■■□□□ 1.94
CLK2-201ENST00000355560 PSTPIP1O43586 416 aa27.18■■□□□ 1.94
CLK2-201ENST00000355560 RPLP2P05387 115 aaKnown RBP27.18■■□□□ 1.94
CLK2-201ENST00000355560 THPOP40225 353 aa27.18■■□□□ 1.94
CLK2-201ENST00000355560 TAP1Q03518 808 aa27.18■■□□□ 1.94
CLK2-201ENST00000355560 MGAT3Q09327 533 aa27.18■■□□□ 1.94
CLK2-201ENST00000355560 RHOT1Q8IXI2 618 aa27.18■■□□□ 1.94
CLK2-201ENST00000355560 ZNF560Q96MR9 790 aa27.18■■□□□ 1.94
CLK2-201ENST00000355560 KIAA1257Q9ULG3 409 aa27.18■■□□□ 1.94
CLK2-201ENST00000355560 NFU1Q9UMS0 254 aa27.18■■□□□ 1.94
CLK2-201ENST00000355560 TTI1O43156 1089 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 TAS2R40P59535 323 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 ZNF252P-AS1Q0IIN9 211 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 PAK2Q13177 524 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 ZDHHC14Q8IZN3 488 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 C12orf29Q8N999 325 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 RAET1EQ8TD07 263 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 C18orf8Q96DM3 657 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 FAM105AQ9NUU6 356 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 TSPAN16Q9UKR8 245 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 TCRBV7S2A1N4TA0A589 114 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 GOLGA8SH3BPF8 625 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 GPD2P43304 727 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 SSR1P43307 286 aaKnown RBP27.17■■□□□ 1.94
CLK2-201ENST00000355560 PDCLQ13371 301 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 TRADDQ15628 312 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 SOWAHAQ2M3V2 549 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 PRELID2Q8N945 189 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 ZFP42Q96MM3 310 aa27.17■■□□□ 1.94
CLK2-201ENST00000355560 PHF2O75151 1096 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 ERBB2P04626 1255 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 PSMC1P62191 440 aaKnown RBP27.16■■□□□ 1.94
CLK2-201ENST00000355560 OGDHQ02218 1023 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 KCTD19Q17RG1 926 aaPredicted RBP27.16■■□□□ 1.94
CLK2-201ENST00000355560 EMBQ6PCB8 327 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 SND1Q7KZF4 910 aaKnown RBP eCLIP27.16■■□□□ 1.94
CLK2-201ENST00000355560 RNF180Q86T96 592 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms